prot_H-elongata_contig181486.4859.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig181486.4859.1
Unique Nameprot_H-elongata_contig181486.4859.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
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BLAST of mRNA_H-elongata_contig181486.4859.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 9.760e-12
Identity = 45/167 (26.95%), Postives = 88/167 (52.69%), Query Frame = 0 
Query:    5 STSNLLGRSLILCAPFDVYFAA-----NNSNIKRALSSMEWLIARELHSLMDPAAKVTTCIQGGEDGYCSRSICLMTQLLTMLENKE----------------LEIMPA------PGGGDISPKLVTASELTSAAKTYLEVVVHQMKIRGLGAPGKKPEKIALLLDP 144
            S   ++GR L L  P   YF       +N  +KR LSS EW++  E+ SL+   +++T  IQG +D + S+++ L+ +++ ML+++                 L+++P       P  G +S + +   +LT+ A+   +V++  M+ +G+G   ++ E+++ LLDP
Sbjct:  124 SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDP 290
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181486.4859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDJ6_9PHAE9.760e-1226.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181486contigH-elongata_contig181486:608..1084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181486.4859.1mRNA_H-elongata_contig181486.4859.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig181486 608..1084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig181486.4859.1 ID=prot_H-elongata_contig181486.4859.1|Name=mRNA_H-elongata_contig181486.4859.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
LRFASTSNLLGRSLILCAPFDVYFAANNSNIKRALSSMEWLIARELHSLM
DPAAKVTTCIQGGEDGYCSRSICLMTQLLTMLENKELEIMPAPGGGDISP
KLVTASELTSAAKTYLEVVVHQMKIRGLGAPGKKPEKIALLLDPTTIECG
RDVCVTGGP
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