prot_H-elongata_contig179629.4764.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179629.4764.1
Unique Nameprot_H-elongata_contig179629.4764.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
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BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.020e-53
Identity = 79/98 (80.61%), Postives = 90/98 (91.84%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIAQ 98
            RNHVQCLQRWKKVLTPGLVKGQW+ EED+LL  +V EGHKNWG+L+AR+PGRTSKQCRERWCHHLDPRIVKG WTEEEDQ +V++ ++MGNKWA IAQ
Sbjct:  101 RNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQ 198
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BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 6.110e-51
Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIAQ 98
            RNHVQCLQRWKKVLTPGLVKGQW+ EED+LL  +V EGHKNWG+L+ARIPGRTSKQCRERWCHHLDPRIVKG WTE EDQ ++ + ++MGNKWA IAQ
Sbjct:   50 RNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQ 147
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BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 152 bits (383), Expect = 6.030e-43
Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNHVQCLQRWKKVL PGLVKGQWS  ED  L  LV +G KNWG LAA++PGRTSKQCRERW HHLDP + KGE+T EED T++ +  E+GNKW+ IA
Sbjct:   60 RNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIA 156
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 142 bits (359), Expect = 1.840e-41
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNH QCLQRW KVL PGLVKG W  +ED+LL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE++ EED+ ++     +GN+W+ IA
Sbjct:   42 RNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIA 138
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.680e-41
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNH QCLQRW KVL PGLVKG W  +EDELL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE+T+EED+ ++     +GN+W+ IA
Sbjct:  124 RNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIA 220
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 143 bits (361), Expect = 7.530e-41
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNH QCLQRW KVL PGLVKG W  EED+LL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE++ EED+ ++     +GN+W+ IA
Sbjct:  115 RNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIA 211
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.970e-40
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNH QCLQRW KVL PGLVKG W  +EDELL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE+++ ED+ ++     +GN+W+ IA
Sbjct:  132 RNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIA 228
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: K3X9G8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9G8_GLOUD)

HSP 1 Score: 141 bits (355), Expect = 2.310e-40
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIAQ 98
            RNH QCLQRW+KVL PGLVKG WS EED++L  LV +G  NWG +A RIPGRT KQCRERW +HLDP I KG +TE+ED  +++  E +GNKW+ IAQ
Sbjct:  101 RNHAQCLQRWRKVLKPGLVKGHWSFEEDQVLEFLVTQGCNNWGQIAERIPGRTPKQCRERWKNHLDPAINKGPYTEDEDSIILSAQERLGNKWSQIAQ 198
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.510e-40
Identity = 64/97 (65.98%), Postives = 72/97 (74.23%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNHVQCLQRWKKVL PGLVKGQW  EED  L KL     KNWG L+  + GRTSKQCRERWCHHLDP I KG +TEEED  ++    E+GN+W+ IA
Sbjct:  139 RNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIA 235
[Close]
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Match: A0A2D4C0J9_PYTIN (Uncharacterized protein n=4 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0J9_PYTIN)

HSP 1 Score: 150 bits (378), Expect = 3.080e-40
Identity = 67/97 (69.07%), Postives = 77/97 (79.38%), Query Frame = 0 
Query:    1 RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIA 97
            RNH QCLQRW KVL PGLVKG W  EEDELL +LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE+T EED+ ++     +GNKW+TIA
Sbjct:  195 RNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVANRIPGRTSKQCRERWYNHLDPSIVRGEYTAEEDRIIIEAQARLGNKWSTIA 291
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179629.4764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K458_9PHAE1.020e-5380.61MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FQG8_ECTSI6.110e-5179.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UU49_9STRA6.030e-4370.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3G911_PHYRM1.840e-4163.92Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2P4Y3D9_9STRA3.680e-4165.98Myb-like DNA-binding protein (Fragment) n=1 Tax=Ph... [more]
D0NJN5_PHYIT7.530e-4163.92Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A3M6VKU0_9STRA1.970e-4062.89Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
K3X9G8_GLOUD2.310e-4064.29Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D8LM16_ECTSI2.510e-4065.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4C0J9_PYTIN3.080e-4069.07Uncharacterized protein n=4 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 19..67
e-value: 2.1E-11
score: 53.9
coord: 70..98
e-value: 82.0
score: 0.4
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 20..64
e-value: 1.2E-13
score: 51.0
coord: 71..98
e-value: 1.0E-8
score: 35.2
NoneNo IPR availableGENE3D1.10.10.60coord: 73..98
e-value: 2.7E-8
score: 35.7
NoneNo IPR availableGENE3D1.10.10.60coord: 17..71
e-value: 7.7E-22
score: 78.9
NoneNo IPR availablePANTHERPTHR45614:SF60coord: 1..98
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 1..98
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 15..69
score: 22.28
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 70..98
score: 12.711
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 17..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179629contigH-elongata_contig179629:2..1017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179629.4764.1mRNA_H-elongata_contig179629.4764.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179629 2..1017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179629.4764.1 ID=prot_H-elongata_contig179629.4764.1|Name=mRNA_H-elongata_contig179629.4764.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
RNHVQCLQRWKKVLTPGLVKGQWSREEDELLTKLVEEGHKNWGALAARIP
GRTSKQCRERWCHHLDPRIVKGEWTEEEDQTLVAMHEEMGNKWATIAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf