prot_H-elongata_contig179161.4743.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179161.4743.1
Unique Nameprot_H-elongata_contig179161.4743.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
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BLAST of mRNA_H-elongata_contig179161.4743.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 8.130e-12
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:    2 SAKLSQYEACDSEISLEETEEDVAITTSKSFVLKSGDELVVSVGRERFHAAEILFTVG 59
            S  LS YEACDS   ++ET++D  +T +K+F LKSG EL V +GRERFHA EILFT G
Sbjct: 1531 SPMLSGYEACDSRDFIDETDKDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFTPG 1588
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BLAST of mRNA_H-elongata_contig179161.4743.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-10
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:    2 SAKLSQYEACDSEISLEETEEDVAITTSKSFVLKSGDELVVSVGRERFHAAEILFT 57
            S  LS YEACDS   +++T+ D  +T +K+F LKSG EL V +GRERFHA EILFT
Sbjct:  906 SPMLSGYEACDSRDFIDDTDTDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFT 961
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179161.4743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHM1_ECTSI8.130e-1260.34TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
A0A6H5JDL2_9PHAE1.350e-1058.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179161contigH-elongata_contig179161:486..984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179161.4743.1mRNA_H-elongata_contig179161.4743.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179161 486..994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179161.4743.1 ID=prot_H-elongata_contig179161.4743.1|Name=mRNA_H-elongata_contig179161.4743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MSAKLSQYEACDSEISLEETEEDVAITTSKSFVLKSGDELVVSVGRERFH
AAEILFTVGDAIEQ*
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