prot_H-elongata_contig178933.4728.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE) HSP 1 Score: 125 bits (315), Expect = 3.810e-32 Identity = 55/62 (88.71%), Postives = 60/62 (96.77%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
+V IAQEFRDHV YFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDE++PLG++GLYWLKV
Sbjct: 709 KVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKV 770
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.610e-24 Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IA+EFR+H FYFPYN+DFRGR YP+PPNLN LGSD RG+L F E RPLGK GL WLK+
Sbjct: 651 KLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKI 712
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A7S2HVI8_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVI8_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.080e-23 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IAQE RD+V YFPYN+DFRGR YPIPPNLN LGSD RG+L F++ +PLG++GL+WLKV
Sbjct: 180 KLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKV 241
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.140e-23 Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IAQE RD+V YFPYN+DFRGR YPIPPNLN LGSD RG+L F++ +PLG++GL+WLKV
Sbjct: 438 KLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKV 499
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: E0XNZ6_SPOSA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=E0XNZ6_SPOSA) HSP 1 Score: 90.5 bits (223), Expect = 1.620e-21 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IA+ F D FYFP+N+DFRGR YPIPPNL+ +G D RG+L+F E++PLG+RGL WLK+
Sbjct: 4 KLEIARAFIDEKFYFPHNLDFRGRAYPIPPNLSHIGDDMCRGLLLFGEAKPLGERGLRWLKI 65
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A5C3L8L0_9AGAR (DNA-directed RNA polymerase n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3L8L0_9AGAR) HSP 1 Score: 95.5 bits (236), Expect = 1.800e-21 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IA+ F D YFP+NMDFRGR YP+PP+LN +G D SRG+LMF+E+RPLG+RGL WLK+
Sbjct: 664 KIEIARAFLDETIYFPHNMDFRGRAYPLPPHLNHIGDDLSRGLLMFNEARPLGERGLRWLKI 725
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A6P9B1T6_PANGU (DNA-directed RNA polymerase n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9B1T6_PANGU) HSP 1 Score: 93.2 bits (230), Expect = 2.280e-21 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IA+ +D VF+FP+N+DFRGRTYP PP+ N LG DF+RG+L+F E +PLG RGL WLK+
Sbjct: 166 KLSIAKHMKDEVFWFPHNLDFRGRTYPCPPHFNHLGGDFTRGILLFAEGKPLGSRGLDWLKI 227
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: D2VYC1_NAEGR (DNA-directed RNA polymerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VYC1_NAEGR) HSP 1 Score: 95.1 bits (235), Expect = 2.460e-21 Identity = 35/62 (56.45%), Postives = 54/62 (87.10%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ +A++F+D+ FYFP+N+DFRGR YPIPP+LN LG+D +RG+L F++ P+GKRG++WLK+
Sbjct: 500 KLKVAEDFKDNTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKI 561
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: Q0R0H7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Naegleria sp. TES-2005 TaxID=345065 RepID=Q0R0H7_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 2.460e-21 Identity = 35/62 (56.45%), Postives = 54/62 (87.10%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ +A++F+D+ FYFP+N+DFRGR YPIPP+LN LG+D +RG+L F++ P+GKRG++WLK+
Sbjct: 535 KLKVAEDFKDNAFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKI 596
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Match: A0A2D4JCF5_MICLE (DNA-directed RNA polymerase (Fragment) n=1 Tax=Micrurus lemniscatus lemniscatus TaxID=129467 RepID=A0A2D4JCF5_MICLE) HSP 1 Score: 90.9 bits (224), Expect = 2.540e-21 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 0
Query: 1 QVGIAQEFRDHVFYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDESRPLGKRGLYWLKV 62
++ IA+ +D VF+FP+N+DFRGRTYP PP+ N LG DF+RG+L+F E +PLG GL WLK+
Sbjct: 54 KLSIAKHMKDEVFWFPHNLDFRGRTYPCPPHFNHLGGDFTRGILLFAEGKPLGPNGLDWLKI 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178933.4728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig178933.4728.1 ID=prot_H-elongata_contig178933.4728.1|Name=mRNA_H-elongata_contig178933.4728.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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