prot_H-elongata_contig177196.4648.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig177196.4648.1
Unique Nameprot_H-elongata_contig177196.4648.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 7.300e-20
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    2 FWPHSQAFSVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIASILPW 54
            F+   +AFSVLVFTAEISMRLFIAPISSKY FSRW Y++SFFG++D+ASI PW
Sbjct:  983 FFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWKYLSSFFGVVDVASIAPW 1035          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.730e-9
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    7 QAFSVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIASILPW 54
            +AFSV +FT +   RL  AP+++ YG +  NY+TSFFGI+D+ASILPW
Sbjct:  997 EAFSVAIFTFDFVARLCTAPVNASYG-TPLNYLTSFFGIVDMASILPW 1043          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: A0A7S0AP21_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AP21_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.470e-7
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   10 SVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIASILPW 54
            SV  F+ E  +RLF AP +++  +S W Y T+FFG++D+ SILPW
Sbjct:  126 SVAFFSVEYILRLFSAPKNNQALYSPWTYATTFFGLVDLISILPW 170          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: A0A7S0YWA5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YWA5_9CRYP)

HSP 1 Score: 52.0 bits (123), Expect = 1.990e-6
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    2 FWPHSQAFSVLVFTAEISMRLFIAPISS--KYGFS-RWNYITSFFGIIDIASILPW 54
            FW   +A SV VFT E++ RL  AP+    + G+S R  Y++SF+G++D+ ++LPW
Sbjct:   34 FWSSFEALSVAVFTFELAGRLATAPLCCPLRDGYSTRCGYLSSFYGVVDLLTVLPW 89          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: K0S063_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC)

HSP 1 Score: 49.7 bits (117), Expect = 1.750e-5
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    7 QAFSVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIASILPW 54
            +A+SV  F+ + ++RLF A  S    +S W Y  +FFGI+D+ SILPW
Sbjct:  969 EAWSVFFFSLDYALRLFSAQKSRDALYSPWVYSQTFFGIVDLLSILPW 1016          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: A0A401XKI3_9FLAO (Potassium voltage gated channel, Shab-related subfamily, member 2 n=1 Tax=Thermaurantimonas aggregans TaxID=2173829 RepID=A0A401XKI3_9FLAO)

HSP 1 Score: 49.3 bits (116), Expect = 2.210e-5
Identity = 21/51 (41.18%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    7 QAFSVLVFTAEISMRLFIAPISSKYGFSR---WNYITSFFGIIDIASILPW 54
            + F+V+VFT E  +R++IAP++  Y  SR     ++TSF+G+ID+ +I+P+
Sbjct:   64 ELFTVVVFTLEYVLRIWIAPVTETYAGSRSPRLRFVTSFYGLIDLLAIMPF 114          
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Match: A0A7S3ANG1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ANG1_9EUKA)

HSP 1 Score: 47.0 bits (110), Expect = 3.990e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    2 FWPHSQAFSVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIASILPW 54
            F+   +A SV  FTAE  +R+F      ++ +S   Y T+FFGIIDI SILP+
Sbjct:   20 FFDVFEAVSVAAFTAEFGLRVFSIGKDREHLYSATFYATTFFGIIDILSILPY 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177196.4648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FN88_ECTSI7.300e-2075.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDK7_9STRA2.730e-956.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0AP21_9STRA7.470e-748.89Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S0YWA5_9CRYP1.990e-642.86Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
K0S063_THAOC1.750e-545.83Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A401XKI3_9FLAO2.210e-541.18Potassium voltage gated channel, Shab-related subf... [more]
A0A7S3ANG1_9EUKA3.990e-545.28Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 2..54
e-value: 2.9E-7
score: 32.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig177196contigH-elongata_contig177196:159..323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig177196.4648.1mRNA_H-elongata_contig177196.4648.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig177196 159..323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig177196.4648.1 ID=prot_H-elongata_contig177196.4648.1|Name=mRNA_H-elongata_contig177196.4648.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
YFWPHSQAFSVLVFTAEISMRLFIAPISSKYGFSRWNYITSFFGIIDIAS
ILPW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf