prot_H-elongata_contig176444.4616.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176444.4616.1
Unique Nameprot_H-elongata_contig176444.4616.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
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BLAST of mRNA_H-elongata_contig176444.4616.1 vs. uniprot
Match: D7FIR5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR5_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.430e-10
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 QELQDIVEQIDMAATFVKIGGFGRLIALVRPGYRAEKV 38
            QELQD+VEQIDMAATF KIGGFGRL+ALV P  R EK+
Sbjct:  245 QELQDVVEQIDMAATFAKIGGFGRLLALVTPSRRPEKL 282
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176444.4616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIR5_ECTSI1.430e-1078.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..36
e-value: 1.5E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176444contigH-elongata_contig176444:718..831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176444.4616.1mRNA_H-elongata_contig176444.4616.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176444 718..831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176444.4616.1 ID=prot_H-elongata_contig176444.4616.1|Name=mRNA_H-elongata_contig176444.4616.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
QELQDIVEQIDMAATFVKIGGFGRLIALVRPGYRAEKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like