prot_H-elongata_contig17607.4599.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17607.4599.1
Unique Nameprot_H-elongata_contig17607.4599.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Match: A0A6H5KRL9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRL9_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 1.420e-62
Identity = 101/152 (66.45%), Postives = 130/152 (85.53%), Query Frame = 0
Query:   44 ESVEWYGTIRLLIFVRKEVYRELSVSTVVIPTGDKPSCVADAPQDYARDTSPDKGAVACFLRDPSAQ--LELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEASLPRTALDRMVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKVS 193
            ++VEWYGTIRLL+FVR+++Y+ L V TVVIP GDKPS VADAP+DYA+DTSPDKGAVAC+L DPS++  L+L +VNCHL+GTNK+GV EAVFDK+RMAQLR+ID AL+ ++P  A   +VL GD+NFRVE+LS  +DK +GGNDFQAV +++
Sbjct:  306 KTVEWYGTIRLLVFVREDLYKNLRVKTVVIPAGDKPSVVADAPEDYAKDTSPDKGAVACYLEDPSSESPLQLALVNCHLYGTNKYGVKEAVFDKYRMAQLRAIDLALKGTIPTAATAPLVLFGDLNFRVEMLSGTEDKAKGGNDFQAVREMA 457          
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Match: A0A7S4RCJ7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCJ7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.430e-20
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   47 EWYGTIRLLIFVRKEVYRE-LSVSTVVI--PTGDKPSCVADAPQ-DYARDTSPDKGAVACFLRDPSAQLELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEASLPRTALD------RMVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKV 192
            +WYG IRLL++V+ EV    +S S++ I  P GDK S  +     +Y    SPDKGA+   L  PS  L LL+ + HL GTNK+ V E +FD  R+ QL++I+ A   +      D      R ++LGD+NFRVEVLS+  +K RGG DF AV ++
Sbjct:  159 KWYGFIRLLVYVKGEVTASNISKSSIPIICPVGDKASSYSTTTHPNYKPSQSPDKGAIC--LAIPS--LSLLLCSMHLAGTNKYNVPETIFDDIRIKQLQTINDACFNNTEMIVDDASFRKLRPIVLGDLNFRVEVLSSEGEKERGGKDFCAVNEI 310          
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Match: A0A7S2XYE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYE2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.290e-19
Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   47 EWYGTIRLLIFVRKEVYRELSVSTVVIPTGDKPSCVADAPQDYARDTSPDKGAVACFLRDPSAQLELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEASLP-RTALDR--MVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKV 192
            EWYG IR+++FV  E   +  V ++VIPTG+K S       +Y + +SPDKGAV   L + +    LL++N HL GTNK+ V E  FDK R  QL  +   L + L  R  LD+  +V +GD NFRV+V +  +D  +GG ++Q V ++
Sbjct:    3 EWYGAIRVMVFVNSEFDPDPMVESLVIPTGNKFSSYRTM-SEYEKYSSPDKGAVGVHLLNQN----LLLLNFHLHGTNKYKVPEEEFDKERDHQLGLVRNGLVSHLGGREQLDKASLVCIGDFNFRVQVSAAPEDCEKGGLNYQKVHQI 146          
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Match: A0A7S4R9V2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R9V2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.580e-14
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 0
Query:   71 VVIPTGDKPSCVADAPQ-DYARDTSPDKGAVACFLRDPSAQLELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEASLPRTALD------RMVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKV 192
            ++ P G+K S  +     +Y    SPDKGA+   L  PS  L LL+ + HL GTNK+ V E +FD  R+ QL++I+ A   +      D      R ++LGD+NFRVEVLS+  +K RGG DF AV ++
Sbjct:   25 IICPVGNKASSYSTTTHPNYKPSQSPDKGAIC--LAIPS--LSLLLCSMHLAGTNKYNVPETIFDDIRIKQLQTINDACFNNTEMIVDDASFRKLRPIVLGDLNFRVEVLSSEGEKERGGKDFCAVNEI 149          
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Match: A0A7S2C3F1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3F1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.370e-14
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 0
Query:   89 YARDTSPDKGAVACFLRDPSAQLELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEASLPRTALD--RMVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKV 192
            Y    S DKGA+A  +     ++ L+ V  HL+GTNKHGV E  FD HR+++L ++   L+    +  ++  R++++GD+NFRVEV +  +DK + G D + V ++
Sbjct:    6 YKDSRSTDKGAIAVVM----PKIRLIFVCAHLYGTNKHGVPEKKFDAHRISELETVYDTLQTIYSQNYIENQRLIIMGDLNFRVEVHAAVEDKEKNGYDTKTVSRL 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17607.4599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KRL9_9PHAE1.420e-6266.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4RCJ7_9STRA2.430e-2042.95Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2XYE2_9STRA1.290e-1940.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4R9V2_9STRA1.580e-1441.09Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2C3F1_9STRA2.370e-1436.79Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 5..192
e-value: 1.2E-6
score: 29.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 45..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17607contigH-elongata_contig17607:260..4173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17607.4599.1mRNA_H-elongata_contig17607.4599.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17607 260..5555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17607.4599.1 ID=prot_H-elongata_contig17607.4599.1|Name=mRNA_H-elongata_contig17607.4599.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MCSMDTLDSLLQGKTISNSNSNSNSKSRNELVNPISSESSEFVESVEWYG
TIRLLIFVRKEVYRELSVSTVVIPTGDKPSCVADAPQDYARDTSPDKGAV
ACFLRDPSAQLELLMVNCHLFGTNKHGVGEAVFDKHRMAQLRSIDAALEA
SLPRTALDRMVLLGDMNFRVEVLSNAKDKVRGGNDFQAVLKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf