prot_H-elongata_contig176051.4598.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176051.4598.1
Unique Nameprot_H-elongata_contig176051.4598.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A6H5K6D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D4_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.000e-32
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 RQP-GFARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            RQP  F RIVVTCEMLR +LGPE+YES+VAARVA PG CTGLAWTPTGGELLFIECTSMPG G VKLTGKLG V   S
Sbjct:  753 RQPLAFPRIVVTCEMLRGVLGPELYESEVAARVATPGTCTGLAWTPTGGELLFIECTSMPGTGAVKLTGKLGEVMQES 830          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 6.930e-32
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 RQP-GFARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            R+P  F RIVVTCEMLR +LGPE+YES+VAARVA PG CTGLAWTPTGGELLFIECTSMPG G VKLTGKLG V   S
Sbjct:  811 RRPLAFPRIVVTCEMLRGVLGPELYESEVAARVATPGTCTGLAWTPTGGELLFIECTSMPGTGAVKLTGKLGEVMQES 888          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A7V2SXP3_9DELT (Endopeptidase La n=1 Tax=Dissulfuribacter thermophilus TaxID=1156395 RepID=A0A7V2SXP3_9DELT)

HSP 1 Score: 85.5 bits (210), Expect = 3.370e-18
Identity = 44/71 (61.97%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    7 RIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            +I VT   LR  LGP  YE +VA RV VPG+ TGLAWTPTGGE+LFIE T M G G + LTGKLG V   S
Sbjct:   96 KIEVTISNLREFLGPPKYELEVAERVRVPGVVTGLAWTPTGGEILFIEATKMEGSGKLILTGKLGDVMKES 166          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A0R3DNE6_9BRAD (Lon protease n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3DNE6_9BRAD)

HSP 1 Score: 86.3 bits (212), Expect = 5.700e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    7 RIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            R+V+    L+SILGP+ YE + A R +VPG+ TGLAWTP GGE+LF+E TS+PG G + LTG+LGAV   S
Sbjct:  579 RVVIAVADLQSILGPKRYEPETAMRTSVPGVATGLAWTPAGGEILFVEATSIPGRGNLILTGQLGAVMKES 649          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A7C3KW54_9BACT (Endopeptidase La (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C3KW54_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 1.440e-17
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    2 QPGFARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            + G  R V+T E +RSILGP  +ES++A R + PG+ TG+AWTP GG++LF+E T MPG G + LTG LG V   S
Sbjct:  530 EAGTERRVITAEGVRSILGPRRFESEIAMRTSTPGVATGMAWTPAGGDILFVEATRMPGKGNLILTGHLGDVMKES 605          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: UPI0018962689 (endopeptidase La n=4 Tax=Methylobacter TaxID=429 RepID=UPI0018962689)

HSP 1 Score: 84.7 bits (208), Expect = 1.980e-17
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    6 ARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            A+ V+  E + +ILGP  +ESDVA R++VPG+ TGLAWTP GG++LFIE T +PG G + LTG+LG V   S
Sbjct:  597 AQEVIDAEQIPAILGPRKFESDVAMRISVPGVATGLAWTPVGGDILFIEATRIPGTGKLILTGQLGEVMKES 668          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A3M9XJ18_9HYPH (Lon protease n=2 Tax=Methylocystis hirsuta TaxID=369798 RepID=A0A3M9XJ18_9HYPH)

HSP 1 Score: 84.7 bits (208), Expect = 1.980e-17
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   10 VTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            +TCE L +ILGP  +ES++A R +VPG+ TGLAWTP GG++LFIE T +PG G + LTG+LG V   S
Sbjct:  589 ITCEHLAAILGPPQFESELAMRTSVPGVATGLAWTPVGGDILFIEATRIPGSGKLILTGQLGEVMRES 656          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A2S6N1U7_9HYPH (Endopeptidase La (Fragment) n=1 Tax=Rhodoblastus sphagnicola TaxID=333368 RepID=A0A2S6N1U7_9HYPH)

HSP 1 Score: 82.4 bits (202), Expect = 2.170e-17
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    4 GFARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            G   + +TC+ L  ILG   YES+VA R +VPG+ TGLAWTP GG++LFIE T  PG G + LTG+LG V   S
Sbjct:   38 GVETVHITCDKLTKILGQPRYESEVAMRTSVPGVATGLAWTPVGGDILFIEATLTPGAGRLILTGQLGDVMRES 111          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A1V5IK49_9EURY (Lon protease n=1 Tax=Euryarchaeota archaeon ADurb.BinA087 TaxID=1852879 RepID=A0A1V5IK49_9EURY)

HSP 1 Score: 84.0 bits (206), Expect = 3.700e-17
Identity = 44/69 (63.77%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    9 VVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            VVT EML  ILG EV   + A  VAVPG+ TGLAWTP GGE+LFIE TSMPG G + LTG+LG V   S
Sbjct:  569 VVTAEMLDPILGREVVRQETARNVAVPGVVTGLAWTPVGGEILFIEGTSMPGKGNLTLTGQLGDVMKES 637          
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Match: A0A7C9VNL8_9BRAD (Lon protease n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A7C9VNL8_9BRAD)

HSP 1 Score: 84.0 bits (206), Expect = 3.700e-17
Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    7 RIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGELLFIECTSMPGGGVVKLTGKLGAVRPSS 77
            R+++T   L++ILGP+ +E ++A R +VPG+ TGLAWTP GG++LF+E TS+PG G + LTG+LG V   S
Sbjct:  579 RVIITVTDLQTILGPKRFEQEIAMRTSVPGVATGLAWTPAGGDILFVEATSIPGRGKLILTGQLGEVMKES 649          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176051.4598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6D4_9PHAE2.000e-3280.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGC2_ECTSI6.930e-3279.49Lon protease homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A7V2SXP3_9DELT3.370e-1861.97Endopeptidase La n=1 Tax=Dissulfuribacter thermoph... [more]
A0A0R3DNE6_9BRAD5.700e-1857.75Lon protease n=5 Tax=Bradyrhizobium TaxID=374 RepI... [more]
A0A7C3KW54_9BACT1.440e-1752.63Endopeptidase La (Fragment) n=1 Tax=bacterium TaxI... [more]
UPI00189626891.980e-1755.56endopeptidase La n=4 Tax=Methylobacter TaxID=429 R... [more]
A0A3M9XJ18_9HYPH1.980e-1757.35Lon protease n=2 Tax=Methylocystis hirsuta TaxID=3... [more]
A0A2S6N1U7_9HYPH2.170e-1754.05Endopeptidase La (Fragment) n=1 Tax=Rhodoblastus s... [more]
A0A1V5IK49_9EURY3.700e-1763.77Lon protease n=1 Tax=Euryarchaeota archaeon ADurb.... [more]
A0A7C9VNL8_9BRAD3.700e-1752.11Lon protease n=4 Tax=Bradyrhizobiaceae TaxID=41294... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 25..77
e-value: 1.4E-10
score: 43.1
IPR008269Peptidase S16, Lon proteolytic domainPFAMPF05362Lon_Ccoord: 10..73
e-value: 4.0E-16
score: 59.2
NoneNo IPR availablePANTHERPTHR10046:SF24LON PROTEASE HOMOLOG 2, PEROXISOMALcoord: 6..72
IPR027065Lon proteasePANTHERPTHR10046ATP DEPENDENT LON PROTEASE FAMILY MEMBERcoord: 6..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176051contigH-elongata_contig176051:516..746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176051.4598.1mRNA_H-elongata_contig176051.4598.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176051 516..746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176051.4598.1 ID=prot_H-elongata_contig176051.4598.1|Name=mRNA_H-elongata_contig176051.4598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
RQPGFARIVVTCEMLRSILGPEVYESDVAARVAVPGMCTGLAWTPTGGEL
LFIECTSMPGGGVVKLTGKLGAVRPSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR008269Lon_proteolytic
IPR027065Lon_Prtase