prot_H-elongata_contig17600.4594.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17600.4594.1
Unique Nameprot_H-elongata_contig17600.4594.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: D7FLF7_ECTSI (Probable Spc3 homolog, subunit of Signal Peptidase Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF7_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 3.770e-52
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQVG 99
            MHT WVR+NAVVFFGLTVLL LSVLTALS +LHQGFPDVRKL V KFRTFR SEGTDRLLLNIDVDADLAPAFNWN+KQLFA+VVAEY+T  NPVNQ  
Sbjct:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQAS 99          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A835YJ42_9STRA (Signal peptidase 22kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ42_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.390e-37
Identity = 60/98 (61.22%), Postives = 81/98 (82.65%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            M+T+WVRLNAVVFFGLTVLLGL+++TA S +LH+G P V+ L + K ++FR+    DR ++N D++ADLAPAFNWNIKQ+F +VVAE+ TK NP+NQ+
Sbjct:    1 MNTVWVRLNAVVFFGLTVLLGLALMTATSTYLHEGHPTVKTLRLNKIKSFRSQSKVDRAIINFDLEADLAPAFNWNIKQIFVFVVAEFATKTNPLNQI 98          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A6V1NT77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NT77_HETAK)

HSP 1 Score: 123 bits (309), Expect = 1.060e-33
Identity = 58/98 (59.18%), Postives = 78/98 (79.59%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            M+T+WVR+NAVVFFGLTVLL L+++ A S +LH+G P+++ L V   R+ ++  G DR L++ D+DADL PAFNWNIKQLF +VVAEY T+ NP+NQV
Sbjct:    4 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKNPLNQV 101          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7S2XZ74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ74_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.500e-32
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            M+TIWVRLNAVVFFG TVLL L+ + + S FLH+G P ++ L +   R+ R  +G DR+L++ D+DADL+ AFNWNIKQLF +VVAEY TK NP NQV
Sbjct:    1 MNTIWVRLNAVVFFGFTVLLCLACMCSFSTFLHKGEPHIKYLGLNTIRSMRAQKGGDRVLISFDIDADLSGAFNWNIKQLFVFVVAEYATKTNPFNQV 98          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7S4J3F9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3F9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.640e-32
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGF--PDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHT+WVRLNAVVFFGLTVLLGLS+L ALS   H     PDV++L ++  R+ ++  G DR LL+ D+D DL PAF+WNIKQLF YVVA Y++  NP NQ+
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLGLSILAALSKSGHSNRYRPDVKRLELKTLRSLKSHGGVDRALLSFDIDVDLRPAFHWNIKQLFVYVVASYESDTNPNNQI 100          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7S2SN40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN40_9STRA)

HSP 1 Score: 119 bits (297), Expect = 9.370e-32
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHT+WVRLNAVVFFGLTV++ L+VLT  S   H+G+P V  L +    T RN    D  +L+ D+ ADL+PAFNWNIKQLF +VVAEY+TK NP+NQV
Sbjct:    1 MHTVWVRLNAVVFFGLTVIVVLAVLTWFSTVTHRGYPTVDTLQLNSIGTLRNHGERDIAILSFDLHADLSPAFNWNIKQLFVFVVAEYRTKTNPLNQV 98          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7S2XM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM83_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.600e-31
Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLH--QGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHT+WVRLNAVVFFGLTVLLGLSVL A+SA  H  +  P V KLS+ + R+ ++  G DR LL+ D+ AD+ PAF+WNIKQLF YVVA Y+T  NP NQ+
Sbjct:    5 MHTVWVRLNAVVFFGLTVLLGLSVLAAISAIGHSTRHKPVVSKLSLNQLRSLKSHGGVDRALLSFDLHADMRPAFHWNIKQLFVYVVASYETDTNPNNQI 104          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: B8CCG8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG8_THAPS)

HSP 1 Score: 114 bits (285), Expect = 4.290e-30
Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLH--QGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHT+WVRLNAVVFFGLTVLL LS+L ALS   H  +  P + KL++   R+ +N  G DR LL+ D+ AD+ PAF+WNIKQ+F YVVA YKT  NP NQV
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALNNLRSVKNHGGVDRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTNPKNQV 100          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7R9UGA1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.250e-29
Identity = 59/99 (59.60%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFL-HQGFPDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHTIWVRLNAVVFF  TVLL LS L A+   L H G P V  L +R+ R+ R     DR +L  D+DADL  AFNWN+KQLF +VVAEY T+ NP+NQV
Sbjct:   18 MHTIWVRLNAVVFFSFTVLLALSTLAAVQTMLFHDGQPVVHTLRLRELRSLRKHANIDRAMLTFDIDADLRGAFNWNVKQLFVFVVAEYATQTNPLNQV 116          
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Match: A0A7R9WMP4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMP4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.180e-29
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGF--PDVRKLSVRKFRTFRNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQV 98
            MHT+WVRLNAVVFFGLTVLLGLS L A+S   H  +  P +  L +RK R+ ++  G DR LL+ D+ AD+APAF+WNIKQLF YVVA Y+T    +NQ+
Sbjct:   67 MHTLWVRLNAVVFFGLTVLLGLSCLAAVSKIGHSLYYKPVIHNLEIRKLRSLKSHGGVDRALLSFDIHADMAPAFHWNIKQLFVYVVASYETPNKKINQI 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17600.4594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF7_ECTSI3.770e-5284.85Probable Spc3 homolog, subunit of Signal Peptidase... [more]
A0A835YJ42_9STRA4.390e-3761.22Signal peptidase 22kDa subunit n=1 Tax=Tribonema m... [more]
A0A6V1NT77_HETAK1.060e-3359.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZ74_9STRA1.500e-3260.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4J3F9_9STRA4.640e-3260.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2SN40_9STRA9.370e-3260.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XM83_9STRA1.600e-3162.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
B8CCG8_THAPS4.290e-3060.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9UGA1_9STRA1.250e-2959.60Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WMP4_9STRA2.180e-2958.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 4..98
e-value: 1.8E-25
score: 89.4
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..98
e-value: 3.0E-20
score: 68.7
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..98
NoneNo IPR availablePANTHERPTHR12804:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17600contigH-elongata_contig17600:3517..3941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17600.4594.1mRNA_H-elongata_contig17600.4594.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17600 3517..4366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17600.4594.1 ID=prot_H-elongata_contig17600.4594.1|Name=mRNA_H-elongata_contig17600.4594.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MHTIWVRLNAVVFFGLTVLLGLSVLTALSAFLHQGFPDVRKLSVRKFRTF
RNSEGTDRLLLNIDVDADLAPAFNWNIKQLFAYVVAEYKTKANPVNQVGH
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3