prot_H-elongata_contig17598.4592.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17598.4592.1
Unique Nameprot_H-elongata_contig17598.4592.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length885
Homology
BLAST of mRNA_H-elongata_contig17598.4592.1 vs. uniprot
Match: D7FQN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN6_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 1.380e-119
Identity = 353/817 (43.21%), Postives = 417/817 (51.04%), Query Frame = 0
Query:    2 ILRQYAGKEDLLIERLEQKYSADLSFARRA---AGLGANRHVPGHAPHAASSAGGALDPRQPRPVRSQYILQAGDV---------------------------------------------------ATSWRSDASSTVTAAAGAPPTSLPPRGAVDSPTTTHGEAPTISSPNYMAYLADQIRYNVEGFLPASSNNDGGGRTGILSGVPTQVMSNSSPWTTQRPPYRDATHRPPNTPAATAHSAGLSTAVGPRTLSRLTSSRDNELNGNDPGGRGSGSGRGIYAENHTLATNNTSRHAPVGQGLAHSEKGVVKEGGGFQTGEMPSGGGVGSWGGQKPETLDPVLVARVKALEDERAGLLSACRRLQSKAEAAAREAAATEELRDAGQRKMAGFAERASAAERQAREAVARLRSLEYEQAALQTEKEKSTRRCAAKHVQLLSAIDVQALLRSQLEGLLEVFPPSMYSSIDD-TRGKAEGERQWGKGRDGGGMGPDDPAPTVAACSHTPPPEMG-DNNTDELTSVSVSPVDDGXXXXXXXXXXXXXXSNGDEAAAEGNVSDVSRGGQGGDEGAGGFVGELERRCAALGVSLRASRREAWAARLARGAAESTVREQRENLAALWARVSELDQSLAKEKEARQVAVQAASGLENELDLQLSRLRAAEARLSDQADESTHLKEELRRASARLVNASAARADLLSFCRQEKTAVELAAAEYVSRAEESAGMRGEEGLARGLELARMAEEAGDKRASAQSIEIDRLGKALFAARADLAGSEASSQGLRRELGRAAETIATLSRDAAAVTAAAV---AGIASPDG 759
            IL QYAGKE LLIERLE KYSADLS+ARRA   A +     +P   P          D  +P   RSQ+                                                           T  RS  S   TA +  P  S    G        +G  P+ S  NYM YLADQIR NVEG LPAS++             P  V                             H    +TA G + L         E+ G   G RG G G G Y      ++ NTS H                                       P  +D  L ARV+ALE+ER GL++ACRR+Q+KAEAAARE AA +EL + GQ+K++GFAERA AAER+AR A AR+R+LEY Q+ALQ EKE S RRCA KH QLLSAID+Q  LRSQLEGLLEV PPS  S       G A   RQ   G           A TVAA S     E   D  +DE+     +PV                   G  A+             GG       + E+ RRC+ L VSLRASRREA  AR +R +AE+TVR+Q   LA L  RVS L+ SLAKE+EA Q A QAASGLE EL+L+L +LR AEA LSDQAD ++ L EELR A ARL  AS ARA L+ FCRQE+ +VE+ AAE V+ AEESAGMRGE+GLARGLELARMAEE GDKRA+   +E+DRLGKALFA+RA+LAGSEA  QGLRREL RAAETI  LSR A A ++ AV   A + SP G
Sbjct:   39 ILTQYAGKEGLLIERLEHKYSADLSYARRAPATAPITPEGGIPPPVP----------DDDKPLTARSQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTLSRSPGS-VDTADSNRPGFSRTASGTAQ----PNGVGPSTS--NYMTYLADQIRSNVEGLLPASNSGXXXXXXXXXXXSPNSVS----------------------------HVPTTATAGGKKQLPA-------EVEGTAWGARG-GRGAGTYTGAGDGSSINTSGHHQY-----------------------------------TPGEVDHTLTARVRALEEERGGLVAACRRMQAKAEAAAREGAAPKELPEGGQKKISGFAERAMAAERRARGATARVRTLEYGQSALQAEKEASERRCAVKHAQLLSAIDLQMSLRSQLEGLLEVVPPSPLSGPSPKANGSASLPRQEAAGS----------AVTVAADSRVASLERPPDPASDEVAPAGPAPV-------------------GGHASGXXXXXXXXXXXXGG-------LNEIRRRCSMLEVSLRASRREALEARRSRDSAETTVRQQSGALAKLQERVSALEASLAKEQEAGQGASQAASGLEAELELRLGQLRKAEADLSDQADANSRLTEELRGALARLRTASTARAALVDFCRQERESVEMLAAERVALAEESAGMRGEDGLARGLELARMAEELGDKRAAGLELEVDRLGKALFASRAELAGSEARVQGLRRELERAAETIVGLSRSAIASSSIAVGEGATVLSPQG 731          
BLAST of mRNA_H-elongata_contig17598.4592.1 vs. uniprot
Match: A0A6H5KSE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE0_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 8.620e-65
Identity = 156/233 (66.95%), Postives = 180/233 (77.25%), Query Frame = 0
Query:  530 LGVSLRASRREAWAARLARGAAESTVREQRENLAALWARVSELDQSLAKEKEARQVAVQAASGLENELDLQLSRLRAAEARLSDQADESTHLKEELRRASARLVNASAARADLLSFCRQEKTAVELAAAEYVSRAEESAGMRGEEGLARGLELARMAEEAGDKRASAQSIEIDRLGKALFAARADLAGSEASSQGLRRELGRAAETIATLSRDAAAVTAAAV---AGIASPDG 759
            L VSLRASRREA   R +R +AE+TVR+QR  LA L  RVS L+ SLAKE+EA + A QAASGLE EL+L+L +LR AEA LSDQAD ++ L EELR A ARL  AS ARA L+ FCRQE+ +VEL AAE V+ AEESAGMRGEEGLARGLELARMAEE GDKRA+   +E+DRLGKALFA+RA+LAGSEA  QGLRREL RAAETI  LSR A A ++ AV   A + SP G
Sbjct:    2 LEVSLRASRREALEVRRSRDSAETTVRQQRGALAKLQERVSALEASLAKEQEAGKGASQAASGLEAELELRLGQLRKAEADLSDQADANSRLTEELREALARLGTASTARAALVDFCRQERESVELLAAERVAVAEESAGMRGEEGLARGLELARMAEELGDKRAAGLELEVDRLGKALFASRAELAGSEARVQGLRRELDRAAETIVGLSRSAIASSSIAVGEGAAVRSPQG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17598.4592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQN6_ECTSI1.380e-11943.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSE0_9PHAE8.620e-6566.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 590..624
NoneNo IPR availableCOILSCoilCoilcoord: 295..329
NoneNo IPR availableCOILSCoilCoilcoord: 344..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17598contigH-elongata_contig17598:1758..6964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17598.4592.1mRNA_H-elongata_contig17598.4592.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17598 1014..7022 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17598.4592.1 ID=prot_H-elongata_contig17598.4592.1|Name=mRNA_H-elongata_contig17598.4592.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=885bp
MILRQYAGKEDLLIERLEQKYSADLSFARRAAGLGANRHVPGHAPHAASS
AGGALDPRQPRPVRSQYILQAGDVATSWRSDASSTVTAAAGAPPTSLPPR
GAVDSPTTTHGEAPTISSPNYMAYLADQIRYNVEGFLPASSNNDGGGRTG
ILSGVPTQVMSNSSPWTTQRPPYRDATHRPPNTPAATAHSAGLSTAVGPR
TLSRLTSSRDNELNGNDPGGRGSGSGRGIYAENHTLATNNTSRHAPVGQG
LAHSEKGVVKEGGGFQTGEMPSGGGVGSWGGQKPETLDPVLVARVKALED
ERAGLLSACRRLQSKAEAAAREAAATEELRDAGQRKMAGFAERASAAERQ
AREAVARLRSLEYEQAALQTEKEKSTRRCAAKHVQLLSAIDVQALLRSQL
EGLLEVFPPSMYSSIDDTRGKAEGERQWGKGRDGGGMGPDDPAPTVAACS
HTPPPEMGDNNTDELTSVSVSPVDDGDGDGDGDGGGSSSDSNGDEAAAEG
NVSDVSRGGQGGDEGAGGFVGELERRCAALGVSLRASRREAWAARLARGA
AESTVREQRENLAALWARVSELDQSLAKEKEARQVAVQAASGLENELDLQ
LSRLRAAEARLSDQADESTHLKEELRRASARLVNASAARADLLSFCRQEK
TAVELAAAEYVSRAEESAGMRGEEGLARGLELARMAEEAGDKRASAQSIE
IDRLGKALFAARADLAGSEASSQGLRRELGRAAETIATLSRDAAAVTAAA
VAGIASPDGDREVERDSDPSRMAHSHKLVAVDSTRDDRGPACVVVKEDVG
AAIKAAVAAATVTPPPPEGTGSSPGVSASTGGTAMTTAVTTATSGAHGSS
PFWMCGEGSLGQEKSSPSSAGRHQAKAGYDVELL*
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