prot_H-elongata_contig175919.4591.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175919.4591.1
Unique Nameprot_H-elongata_contig175919.4591.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig175919.4591.1 vs. uniprot
Match: D7FH33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH33_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 9.850e-59
Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 VEGDYGGYAWTEMMHMYFGDTALHIALKWKRYRAVKALLSMRPDWTIPNEYGVTAESLALKVYGKDIATLKDEQEHEYENDAMWVEEEAMRRLVSAEEAARERARLKFLAELHATRTVGVEEEAEILLGCGRVL 134
            VE DYGGYAWT+ MH +FGDTALHIALKWKRYRAVKA+LS+RP+WTIPNE GVTAE L L++YGK +A  KDEQE EYENDAM  EEEAMR L++AE+AAR++ARL FL   HA RT+G++ EA ILL  GRV+
Sbjct:   47 VEIDYGGYAWTQWMHRHFGDTALHIALKWKRYRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEEAMRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAILLEHGRVV 180          
BLAST of mRNA_H-elongata_contig175919.4591.1 vs. uniprot
Match: A0A835Z280_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z280_9STRA)

HSP 1 Score: 105 bits (261), Expect = 6.660e-26
Identity = 55/130 (42.31%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    5 YGGYAWTEMMHMYFGDTALHIALKWKRYRAVKALLSMRPDWTIPNEYGVTAESLALKVYGKDIATLKDEQEHEYENDAMWVEEEAMRRLVSAEEAARERARLKFLAELHATRTVGVEEEAEILLGCGRVL 134
            YG YA+T+ M ++ GDTALH+ALKW++ RA KALL +   W I N  GVTAE++ +K + K + TLK +QE EY   AM  E++ M  L++ E++ ++      L +L+  RT G  +EA +L+  GR++
Sbjct:   50 YGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAMLLMMAGRIM 179          
BLAST of mRNA_H-elongata_contig175919.4591.1 vs. uniprot
Match: A0A7S3Y2N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2N4_HETAK)

HSP 1 Score: 73.9 bits (180), Expect = 5.960e-14
Identity = 52/127 (40.94%), Postives = 66/127 (51.97%), Query Frame = 0
Query:    1 VEGDYGGYAWTEMMHMYFGDTALHIALKWKRYRAVKALLSMRPDWTIPNEYGVTAESLALKVYGKDIATLKDEQEHEYENDAMWVEEEAMRRLVSAEEAARERARLKFLAELHATRTVGVEEEAEIL 127
            V  +YGGY WT  +H Y+GDTA+H+A+K+ R R  + LL + PD T+ N  G TA  LA   Y K I  L           A W EE   R  ++AEEA  ER RL+  AEL A       E   +L
Sbjct:   45 VGEEYGGYRWTARLHEYYGDTAVHLAIKFSRPRIFRKLLLLAPDLTLYNGQGQTAAELAESTYKKPIKALVR---------AAWEEETRDR--MAAEEAY-ERRRLREQAELDARARAARREGLRLL 159          
BLAST of mRNA_H-elongata_contig175919.4591.1 vs. uniprot
Match: A0A7S2C3Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Y6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.570e-10
Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 0
Query:    7 GYAWTEMMHMYFGDTALHIALKWKRYRAVKALLSM---RPD-----------WTIPNEYGVTAESLALKVYGKDIATLKDEQEHEYENDAMWVEEEAMRRLVSAEEAAR 101
            GYAW+   H   GDT LH+A++WKRY+A+K L  +   RPD           + + +  G TAESL    +G+ IA L  +QE     D +   EEA R+     EAAR
Sbjct:    1 GYAWSAWSHRMAGDTVLHLAMRWKRYKALKGLYRLPAQRPDGMVGAGQPFFDYDVRDVDGQTAESLVTAEFGRTIANLWTKQE----KDDIEAAEEAARQAALEAEAAR 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175919.4591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FH33_ECTSI9.850e-5970.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z280_9STRA6.660e-2642.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3Y2N4_HETAK5.960e-1440.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2C3Y6_9STRA7.570e-1038.53Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 14..103
e-value: 8.1E-7
score: 31.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 17..68
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 18..59
score: 8.614

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175919contigH-elongata_contig175919:536..1248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175919.4591.1mRNA_H-elongata_contig175919.4591.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175919 536..1248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175919.4591.1 ID=prot_H-elongata_contig175919.4591.1|Name=mRNA_H-elongata_contig175919.4591.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
VEGDYGGYAWTEMMHMYFGDTALHIALKWKRYRAVKALLSMRPDWTIPNE
YGVTAESLALKVYGKDIATLKDEQEHEYENDAMWVEEEAMRRLVSAEEAA
RERARLKFLAELHATRTVGVEEEAEILLGCGRVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom