prot_H-elongata_contig175635.4581.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175635.4581.1
Unique Nameprot_H-elongata_contig175635.4581.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A7S4DC20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 2.910e-11
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIV 60
            MPG VEKV VA G  V EG+ +AVVSAMKMEV+VKA   GK++ +  E G KV++GAL++
Sbjct:  602 MPGAVEKVCVAAGDDVVEGQTIAVVSAMKMEVEVKAPGRGKIKRIVTETGSKVIDGALMI 661          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A2A4IPJ0_9SPIR (Acetyl-CoA carboxylase n=5 Tax=Brachyspira TaxID=29521 RepID=A0A2A4IPJ0_9SPIR)

HSP 1 Score: 57.4 bits (137), Expect = 7.500e-9
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTLK 63
            MPG +    VAVG  V+EG+VVA++ AMKME ++ A ++G+V+S+ VE+G  VVEG +I+ +K
Sbjct:   70 MPGTIVSFSVAVGDKVTEGQVVAILEAMKMENELTAPASGEVKSIHVEKGSSVVEGQVILQIK 132          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: R5H6H2_9SPIR (Biotin/lipoyl attachment domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=R5H6H2_9SPIR)

HSP 1 Score: 58.2 bits (139), Expect = 2.810e-8
Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            +PG V KVLV+ G ++SEG+V+AV+ AMKME ++K+  +G V+S+ +E G KVV G ++VT+
Sbjct:  533 LPGNVLKVLVSNGDNISEGDVIAVIEAMKMETEIKSPVSGTVKSVDIEVGDKVVTGQVLVTV 594          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A3D0SJA0_9CYAN (Biotin attachment protein n=1 Tax=Cyanobacteria bacterium UBA11991 TaxID=2055789 RepID=A0A3D0SJA0_9CYAN)

HSP 1 Score: 56.6 bits (135), Expect = 9.840e-8
Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            +PG V KVLV+ G S++EG+V+AV+ AMKME ++K+   G V+S+ +E G KV  G ++VT+
Sbjct:  536 LPGNVLKVLVSEGDSIAEGDVIAVIEAMKMETEIKSPVGGTVKSVDIEVGNKVQTGQVLVTI 597          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A4U7NDG9_9SPIR (Biotin/lipoyl-binding protein n=1 Tax=Brachyspira catarrhinii TaxID=2528966 RepID=A0A4U7NDG9_9SPIR)

HSP 1 Score: 54.3 bits (129), Expect = 1.250e-7
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            MPG +    V+VG  VSEG+VVA++ AMKME ++ A ++GKV+S+ VE+G  V+E  +I+ +
Sbjct:   73 MPGTILSFTVSVGDEVSEGQVVAILEAMKMENELTAPASGKVKSIHVEKGSSVIENQVILQI 134          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: R7LS57_9FUSO (Pyruvate carboxylase beta chain n=5 Tax=Bacteria TaxID=2 RepID=R7LS57_9FUSO)

HSP 1 Score: 55.8 bits (133), Expect = 1.840e-7
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            +PG V KVLV  G S+ EG+V+AVV AMKME ++K+  +G V+S+ +E G KV  G ++VT+
Sbjct:  535 LPGNVLKVLVTEGDSIEEGDVLAVVEAMKMETEIKSPVSGTVKSVDIEVGNKVQTGQVLVTI 596          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A292RRW9_9BACT (Biotin attachment protein n=8 Tax=Bacteria TaxID=2 RepID=A0A292RRW9_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 4.710e-7
Identity = 27/62 (43.55%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            +PG V ++  ++G S++EG+V+ V+ AMKME++VKA  AG ++S+AV +G KVV G  +  +
Sbjct:  536 VPGNVLRIEASIGDSIAEGDVIMVLEAMKMEIEVKAPKAGTIQSIAVAQGDKVVTGQALAVI 597          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: UPI0004293ED8 (sodium-extruding oxaloacetate decarboxylase subunit alpha n=1 Tax=Halomonas halocynthiae TaxID=176290 RepID=UPI0004293ED8)

HSP 1 Score: 54.7 bits (130), Expect = 4.710e-7
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTL 62
            M G + KV V+VG SV+EG+VV ++ AMKMEV V+AT++GKV ++ V EG  V  G  ++TL
Sbjct:  547 MAGNIFKVNVSVGDSVTEGDVVIILEAMKMEVPVRATTSGKVSAVQVSEGSSVAVGDPLLTL 608          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: A0A7H0SMF8_9CORY (Biotin carboxylase n=2 Tax=unclassified Corynebacterium TaxID=2624378 RepID=A0A7H0SMF8_9CORY)

HSP 1 Score: 54.3 bits (129), Expect = 6.430e-7
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTLK 63
            M G V KV VA G +VSEG+ V V+ AMKME  VKA  +G ++SL+VE GG V +GA+++ ++
Sbjct:  527 MQGTVIKVNVAEGDTVSEGDTVVVLEAMKMENPVKAHKSGTIKSLSVEAGGTVTKGAVLLEIE 589          
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Match: UPI000A76CACA (biotin/lipoyl-binding protein n=1 Tax=Rhodococcus sp. EPR-157 TaxID=1813677 RepID=UPI000A76CACA)

HSP 1 Score: 51.6 bits (122), Expect = 8.710e-7
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEGGKVVEGALIVTLK 63
            M G V KV V  G  V+EG+++AV+ AMKME  V A  AGKV  LAV+ G  + +G ++  LK
Sbjct:   49 MQGTVVKVAVEEGQDVAEGDLIAVLEAMKMENPVNAHKAGKVTGLAVQPGSAITQGTVLAELK 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175635.4581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DC20_HETAK2.910e-1158.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2A4IPJ0_9SPIR7.500e-949.21Acetyl-CoA carboxylase n=5 Tax=Brachyspira TaxID=2... [more]
R5H6H2_9SPIR2.810e-850.00Biotin/lipoyl attachment domain-containing protein... [more]
A0A3D0SJA0_9CYAN9.840e-848.39Biotin attachment protein n=1 Tax=Cyanobacteria ba... [more]
A0A4U7NDG9_9SPIR1.250e-746.77Biotin/lipoyl-binding protein n=1 Tax=Brachyspira ... [more]
R7LS57_9FUSO1.840e-750.00Pyruvate carboxylase beta chain n=5 Tax=Bacteria T... [more]
A0A292RRW9_9BACT4.710e-743.55Biotin attachment protein n=8 Tax=Bacteria TaxID=2... [more]
UPI0004293ED84.710e-751.61sodium-extruding oxaloacetate decarboxylase subuni... [more]
A0A7H0SMF8_9CORY6.430e-750.79Biotin carboxylase n=2 Tax=unclassified Corynebact... [more]
UPI000A76CACA8.710e-747.62biotin/lipoyl-binding protein n=1 Tax=Rhodococcus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 3..62
e-value: 1.6E-15
score: 56.7
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 1..63
score: 24.127
NoneNo IPR availableGENE3D2.40.50.100coord: 1..63
e-value: 4.5E-17
score: 63.8
NoneNo IPR availablePANTHERPTHR18866CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASEcoord: 1..63
IPR001882Biotin-binding sitePROSITEPS00188BIOTINcoord: 19..36
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175635contigH-elongata_contig175635:624..821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175635.4581.1mRNA_H-elongata_contig175635.4581.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175635 624..833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175635.4581.1 ID=prot_H-elongata_contig175635.4581.1|Name=mRNA_H-elongata_contig175635.4581.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MPGVVEKVLVAVGASVSEGEVVAVVSAMKMEVQVKATSAGKVESLAVEEG
GKVVEGALIVTLKGC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR001882Biotin_BS
IPR011053Single_hybrid_motif