prot_H-elongata_contig17529.4567.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17529.4567.1
Unique Nameprot_H-elongata_contig17529.4567.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 9.370e-118
Identity = 174/200 (87.00%), Postives = 185/200 (92.50%), Query Frame = 0
Query:    1 MSRRTSSLDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGGSSCC 200
            MSRR  S+DS+SREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDG+PMKFQIWDTAGQEKYHSLAPMYYRGA AAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIA+AGNKRDLES+REVESS+A+AYA+EIGAMFVETSAK  THVQD+FVELSKRLPKR+P P  +   LN DS G SS C
Sbjct:    1 MSRR-GSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSC 199          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.790e-85
Identity = 130/194 (67.01%), Postives = 162/194 (83.51%), Query Frame = 0
Query:    9 DSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGGSS--CC 200
            D ++REVKVVLLGDTGVGKSSLV RF+TN FK Y ESTIGASFMSK+IMVDG+P+KFQIWDTAGQEKYHSLAPMYY+GAAAAIVVYDITK  +F+TLK+W+ EL++QGP++I IA+AGNK DLESEREV+++ A++YA  IGA F+ETSAK   +V ++F  +SK+LP+++ A     + LN  +G GSS  CC
Sbjct:    6 DQRAREVKVVLLGDTGVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYH-NKLNLKAGKGSSGGCC 198          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 9.660e-85
Identity = 133/194 (68.56%), Postives = 156/194 (80.41%), Query Frame = 0
Query:   11 KSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGG----SSCC 200
            K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMIMV+  P+K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  S  TLK W+ EL+  GP++I IAIAGNK DLE +REV S+ AKAYA+EIGA+F+ETSAK DT+V D+F+ +SK+LP      +   + L  D  GG    + CC
Sbjct:    7 KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAETNALPEIL--DPYGGVQQKNRCC 198          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 255 bits (652), Expect = 8.450e-84
Identity = 130/195 (66.67%), Postives = 156/195 (80.00%), Query Frame = 0
Query:    9 DSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGG---GSSCC 200
            +SK+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+  P+K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE +REV +S A+AYA EIGA+F+ETSAK DT+V D+F+++S+ LP      +   + ++   GG    S CC
Sbjct:    6 NSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEIVDPYGGGKKKSSGCC 200          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.130e-83
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0
Query:    1 MSRRTSSLDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESER 135
            MSRR  S+DS+SREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDG+PMKFQIWDTAGQEKYHSLAPMYYRGA AAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIA+AGNKRDLES+R
Sbjct:    1 MSRR-GSMDSRSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 253 bits (647), Expect = 4.700e-83
Identity = 129/194 (66.49%), Postives = 154/194 (79.38%), Query Frame = 0
Query:   10 SKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGG---GSSCC 200
            SK+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+  P+K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE +REV +S A+AYAEEIGA+F+ETSAK D +V D+F+++S+ LP      +   + ++   GG      CC
Sbjct:    6 SKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALPTASNESNALPEIVDPYGGGKKKSGGCC 199          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 246 bits (627), Expect = 4.840e-80
Identity = 126/192 (65.62%), Postives = 151/192 (78.65%), Query Frame = 0
Query:   11 KSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGGSS--CC 200
            K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  S +TLK W+ EL+  GP +I IAIAGNK DL+ +REV S  AKAYA+EIGA+F+ETSAK DT+V D+F  +S++LP      +   + ++   GG     CC
Sbjct:    6 KAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLPSPAGDNNALPEIVDPYGGGKKKGGCC 197          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 6.320e-78
Identity = 119/166 (71.69%), Postives = 143/166 (86.14%), Query Frame = 0
Query:   11 KSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLP 176
            ++REVKVVLLGDTGVGKSSLV RFVTNNFKPYSESTIGASFM+KM+++D  P+K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  SF TLK W+ EL+  GP+DI IAIAGNK DL  +REVE   A+ YA  IGA+++ETSAK D++V+ +FV+++ RLP
Sbjct:   88 EAREVKVVLLGDTGVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.990e-77
Identity = 127/201 (63.18%), Postives = 156/201 (77.61%), Query Frame = 0
Query:    1 MSRRTSSLDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLN-FDSGGGSSCC 200
            ++   S+  +K+REVKVVLLGDTGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DL+ +REV S+ AKAYA+EIGA+F+ETSAK DT+V D+F  +S++LP      H   + ++ + SG     C
Sbjct:  188 LATNMSADGTKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLPSPAGDNHALPEIVDPYGSGKAKGGC 388          
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Match: F0Y0I1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0I1_AURAN)

HSP 1 Score: 236 bits (601), Expect = 4.480e-76
Identity = 122/190 (64.21%), Postives = 142/190 (74.74%), Query Frame = 0
Query:   11 KSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIGAMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGGSSCC 200
            ++RE KVVLLGDTGVGKSSL  R+VTN FKPYSESTIGASFMSKMI+VDGAP K QIWDTAGQEKYHSLAPMYYRGAAAAI+V+DITK  S   LK W+ ELQ QGP+ +A+AIAGNK DL   R V +  AKA+A +IGA++ ETSAK DT+V  +F +L +R P    A    A  L  D+     CC
Sbjct:    7 RTRECKVVLLGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRAVPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAPAGGAARTDDAFDLGHDAAPRRGCC 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17529.4567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE80_9PHAE9.370e-11887.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SUM8_9STRA4.790e-8567.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0WNT1_9STRA9.660e-8568.56Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
D0N0I0_PHYIT8.450e-8466.67Rab5 family GTPase, putative n=2 Tax=Phytophthora ... [more]
D8LEW7_ECTSI1.130e-8394.07Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
K3X978_GLOUD4.700e-8366.49Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A067CI89_SAPPC4.840e-8065.63Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S1CIP5_9STRA6.320e-7871.69Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3R7AA57_9STRA1.990e-7763.18Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
F0Y0I1_AURAN4.480e-7664.21Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 38..54
score: 30.04
coord: 15..36
score: 48.92
coord: 56..78
score: 47.9
coord: 118..131
score: 39.45
coord: 153..175
score: 35.52
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 20..198
e-value: 3.5E-4
score: 10.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 12..178
e-value: 1.3E-31
score: 121.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 15..178
e-value: 2.1E-73
score: 259.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 17..173
e-value: 6.9E-10
score: 7.5
NoneNo IPR availableGENE3D3.40.50.300coord: 9..198
e-value: 8.3E-64
score: 216.6
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 12..178
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 12..178
NoneNo IPR availablePROSITEPS51419RABcoord: 10..200
score: 31.498
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 13..167
e-value: 3.0E-29
score: 99.9
IPR001806Small GTPasePFAMPF00071Rascoord: 16..175
e-value: 7.7E-57
score: 191.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17529contigH-elongata_contig17529:819..3920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17529.4567.1mRNA_H-elongata_contig17529.4567.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17529 26..4242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17529.4567.1 ID=prot_H-elongata_contig17529.4567.1|Name=mRNA_H-elongata_contig17529.4567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MSRRTSSLDSKSREVKVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGAS
FMSKMIMVDGAPMKFQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITKMH
SFRTLKEWINELQAQGPQDIAIAIAGNKRDLESEREVESSVAKAYAEEIG
AMFVETSAKMDTHVQDVFVELSKRLPKRQPAPHVAADTLNFDSGGGSSCC
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase