prot_H-elongata_contig17528.4566.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17528.4566.1
Unique Nameprot_H-elongata_contig17528.4566.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: D7FRD4_ECTSI (Retinitis pigmentosa 2 (X-linked recessive) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD4_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 6.820e-60
Identity = 97/141 (68.79%), Postives = 108/141 (76.60%), Query Frame = 0
Query:    4 QVFVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGG-ETDWSCL 143
            +V VREPGSIGGQQFIVEECS+C+VYLLDHTAALTID+C       GPC             VV+ACQQFRARD    TFFLFS T+PVIESS  LRF CYTLDYFSLAGQF+ A+LSVW+N+WSQI NFTGG + DWSCL
Sbjct:   52 EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCXXXXXXXGPCXXXXXXXXXXXXTVVVACQQFRARDXXXXTFFLFSATQPVIESSVGLRFGCYTLDYFSLAGQFAAAKLSVWNNRWSQIHNFTGGGDGDWSCL 192          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A2D4BH13_PYTIN (XRP2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH13_PYTIN)

HSP 1 Score: 183 bits (464), Expect = 4.360e-54
Identity = 77/142 (54.23%), Postives = 103/142 (72.54%), Query Frame = 0
Query:    2 SPQVFVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
            +P    + PGSI GQQF++E CS+CD+++LDH  A+ ID C +CRI  GPCESS+F+RNCK C +V A QQFR RDC     +L+S+T+P+IESST +RFACY + YFSL  QF  A+ SVW+N+WS+++NFT     W  L
Sbjct:   51 APTFLAKLPGSINGQQFLIENCSECDIFVLDHCTAVQIDDCVNCRIVIGPCESSLFLRNCKQCTIVCAVQQFRTRDCEDIDVYLYSSTEPIIESSTRMRFACYPMTYFSLQHQFDQAKFSVWNNRWSEVYNFTPDHGSWKAL 192          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A2P4YDP5_9STRA (Protein XRP2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDP5_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.430e-52
Identity = 78/138 (56.52%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PGSI GQQF++EEC +CD++LLDH  ++ ID C +CRI  GPCESSVF+RNCK C V+ A QQFR RDC     +L+S T P+IE+S+ LRFAC+ L YFSL  QF  A+ S W+NKWS+IFNFT     W  L
Sbjct:   60 LAKLPGSINGQQFLIEECHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSVTDPIIETSSRLRFACFPLTYFSLQQQFRQAKFSPWNNKWSEIFNFTPDHGGWKPL 197          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: V9G2C2_PHYPR (Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9G2C2_PHYPR)

HSP 1 Score: 176 bits (447), Expect = 1.940e-51
Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PGSI GQQF++E+C +CD++LLDH  ++ ID C +CRI  GPCESSVF+RNCK C VV A QQFRARDC   + +L+S T+P+IE S+ LRFAC+ L YFSL  QF  A+ S W+NKWS++F+FT     W  L
Sbjct:   57 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCESSVFLRNCKRCTVVCAVQQFRARDCEDVSVYLYSATEPIIEMSSGLRFACFPLTYFSLQQQFRQAKFSPWNNKWSELFDFTPDHGGWKPL 194          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: G4ZD48_PHYSP (Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZD48_PHYSP)

HSP 1 Score: 175 bits (444), Expect = 4.610e-51
Identity = 76/138 (55.07%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PGSI GQQF++E+C +CD++LLDH  ++ ID C +CRI  GPCESSVF+R+CK C VV A QQFR RDC     +L+S T+P+IE+S+ LRFAC+ L YFSL  QF  A+ S W+NKWS+IF+FT     W+ L
Sbjct:   63 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRDCKKCTVVCAAQQFRTRDCEDLDVYLYSATEPIIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPDHGGWTPL 200          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A329T3Q5_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3Q5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 5.700e-51
Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PGSI GQQF++E+C +CD++LLDH  ++ ID C +CRI  GPCESSVF+RNCK C VV A QQFR RDC   + +L+S T+P+IE+S+ LRFAC+ L YFSL  QF   + S W+NKWS+IF+FT     W  L
Sbjct:   59 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRNCKRCTVVCAVQQFRTRDCEDVSVYLYSATEPIIETSSGLRFACFPLTYFSLQQQFRQVKFSPWNNKWSEIFDFTPDHGGWKPL 196          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: K3XBN6_GLOUD (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBN6_GLOUD)

HSP 1 Score: 172 bits (435), Expect = 6.030e-51
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 0
Query:    3 PQVFVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
            P +  + PGSI GQQFI+E C  CD++LLD+  ++ ID C DCRI  GPC++S+F+RNCK C +V A QQFR RDC     +L S T+P+IE+S  LRFAC+ L YFSL  QF  A  SVW+NKWS+I+NFT     W+ L
Sbjct:   48 PSLLTKLPGSINGQQFIIEGCRGCDIFLLDNCTSVQIDECIDCRIVVGPCQASLFLRNCKKCTIVCAVQQFRTRDCEDVDVYLHSVTEPIIETSARLRFACFPLSYFSLQQQFDRANFSVWNNKWSEIYNFTPAYGAWTPL 188          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A225V0F5_9STRA (Protein XRP2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0F5_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.440e-50
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PG+I GQQF++E+C +CD++LLDH  ++ ID C +CRI  GPCESSVF+RNCK C V+ A QQFR RDC     +L+STT P+IE+S+ +RF C+ L YFSL  QF  A+ S W+NKWS+IF+FT     W  L
Sbjct:   58 LAKLPGTINGQQFVIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCESSVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSTTDPIIETSSRMRFTCFPLTYFSLHQQFRQAKFSPWNNKWSEIFDFTPDHGGWKPL 195          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A8K1FEW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEW1_PYTOL)

HSP 1 Score: 170 bits (431), Expect = 3.180e-49
Identity = 70/142 (49.30%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    2 SPQVFVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
            S    V+ PGS+ GQQF++E C DCD+++LDH  ++ ID C +CRI  GPC +S+F+RNC++C +V A QQFR RDC     +L+S T+P+IE+S+ +RFAC+ L YF+L  QF  A+ SVW+N+WS+I+NFT     W  +
Sbjct:   44 SASFLVKLPGSVNGQQFLIEACRDCDIFVLDHCTSVQIDDCVNCRIVIGPCNASLFLRNCRDCTLVCAVQQFRTRDCEKIDVYLYSATEPIIETSSQMRFACFPLAYFNLQQQFDAAKFSVWNNRWSEIYNFTPEHGAWKAI 185          
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Match: A0A6A4FTT6_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FTT6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.680e-49
Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    6 FVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTGPCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLRFACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL 143
              + PGSI GQQF++E+C +CD++LLDH  ++ ID C +CR+  GPCESSVF+R+CK C VV   QQFRA DC     FL+S T+PVIE+S+ LRFAC+ L YFSL  QF  A+ S W+NKWS+IF+FT     W+ L
Sbjct:   55 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDGCVNCRVVVGPCESSVFLRDCKRCTVVCVAQQFRACDCEDMDVFLYSATEPVIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPDCGGWTPL 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17528.4566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRD4_ECTSI6.820e-6068.79Retinitis pigmentosa 2 (X-linked recessive) n=1 Ta... [more]
A0A2D4BH13_PYTIN4.360e-5454.23XRP2-like protein n=1 Tax=Pythium insidiosum TaxID... [more]
A0A2P4YDP5_9STRA5.430e-5256.52Protein XRP2 n=1 Tax=Phytophthora palmivora var. p... [more]
V9G2C2_PHYPR1.940e-5155.80Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID... [more]
G4ZD48_PHYSP4.610e-5155.07Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6... [more]
A0A329T3Q5_9STRA5.700e-5155.07Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
K3XBN6_GLOUD6.030e-5153.90C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A225V0F5_9STRA4.440e-5053.62Protein XRP2 n=1 Tax=Phytophthora megakarya TaxID=... [more]
A0A8K1FEW1_PYTOL3.180e-4949.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4FTT6_9STRA3.680e-4955.07Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006599CARP motifSMARTSM00673carpcoord: 23..60
e-value: 6.0E-5
score: 32.4
coord: 61..95
e-value: 3.4E-4
score: 29.9
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 1..143
e-value: 3.0E-58
score: 198.1
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 15..133
e-value: 5.4E-41
score: 139.1
IPR039093Protein XRP2PANTHERPTHR15440XRP2 PROTEINcoord: 5..142
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 1..135
score: 32.672

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17528contigH-elongata_contig17528:4326..5521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17528.4566.1mRNA_H-elongata_contig17528.4566.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17528 4326..5521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17528.4566.1 ID=prot_H-elongata_contig17528.4566.1|Name=mRNA_H-elongata_contig17528.4566.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
MSPQVFVREPGSIGGQQFIVEECSDCDVYLLDHTAALTIDVCADCRIFTG
PCESSVFIRNCKNCVVVLACQQFRARDCSGCTFFLFSTTKPVIESSTDLR
FACYTLDYFSLAGQFSVARLSVWDNKWSQIFNFTGGETDWSCL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006599CARP_motif
IPR016098CAP/MinC_C
IPR012945Tubulin-bd_cofactor_C_dom
IPR039093XRP2
IPR017901C-CAP_CF_C-like