prot_H-elongata_contig175151.4561.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175151.4561.1
Unique Nameprot_H-elongata_contig175151.4561.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 184 bits (466), Expect = 3.300e-50
Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 0
Query:    1 MENLFEEATVKAVIKKANRQSAAGSSGLRYSHSQVALCDELVEDLAAFAALVFFSRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            +E  F   TV A I++ N Q + G SGLR+S  Q +L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR+ G V CR+YG  LA++F+P  QYGVAV GG +++   A L  +    +L+YD + AFNS+ R   LPALA+++P M+PYA N+YAREPPK
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPK 1333          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 7.860e-41
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    5 FEEATVKAVIKKANRQSAAGSSGLRYSHSQVA-LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            FE   +K  +KKAN QSA G  GLR+S+ Q   + D   E LA F+  VF+    LP  FW LHTSANLSALG+K RP+A G VLRR+     CR+Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A   P +V Y  N+YAR   K
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAK 297          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.360e-39
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    5 FEEATVKAVIKKANRQSAAGSSGLRYSHSQVA-LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            FE   +K  +KKAN QSA G  GLR+S+ Q   + D   E LA F+  VF+    LP  FW LHTSANLSALG+K RP+A G VLRR+     CR+Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A   P +V Y  N+YAR   K
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAK 297          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 5.330e-39
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    5 FEEATVKAVIKKANRQSAAGSSGLRYSHSQVA-LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            FE   +K  +KKAN QSA G  GLR+S+ Q   + D   E LA F+  VF+    LP  FW LHTSANLSALG+K RP+A G VLRR+     CR+Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A   P +V Y  N+YAR   K
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAK 297          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 9.730e-39
Identity = 82/178 (46.07%), Postives = 108/178 (60.67%), Query Frame = 0
Query:    5 FEEATVKAVIKKANRQSAAGSSGLRYSHSQVA-LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            FE   +K  +KKAN QSA G  GLR+S+ Q   + D   E LA F+  VF+    LP  FW LHTSANLSALG+K RP+A G VLRR+     C +Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A   P +V Y  N+YAR   K
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAK 297          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.010e-32
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 0
Query:   37 LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            + D+  E LA F+  VF+    LP +FW   TSA+LSALG+K RP+A G VLRR+     CR+Y + +AD F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NSI R   L A+A   P +V Y  NLYAR   K
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAK 145          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 9.350e-31
Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   37 LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            + D   E LA F+  VF+    LP  FW LHTSANLSALG+K RP+A G VLRR+     CR+Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A   P +  Y  N+YAR   K
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAK 145          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.030e-29
Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   37 LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMVPYAFNLYAREPPK 180
            + D   E LA F+  VF+    LP   W LHTSANLSALG+K RP+A G VLRR+      R+Y   +A+ F+  +Q+G  V GGV+I+  TA L  +   TILS+D + A+NS+ R   LPA+A + P +V Y  N+YAR   K
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAK 145          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.850e-23
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 0
Query:   37 LCDELVEDLAAFAALVFF-SRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVS------------CRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALA 160
            + D+    LA F+  VF+    LP +FW LHTSA+LSALG+K RP+A G VLRR+                 CR+Y + +AD F+  +Q+G  V GGV+I+  TA    +   TILS+D + A+NSI R   L A+A
Sbjct:    1 MSDDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.580e-15
Identity = 52/172 (30.23%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    2 ENLFEEATVKAVIKKANRQSAAGSSGLRYSHSQVALCDELVEDLAAFAALVFFSRVL------PQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYGRKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSIYRHRFLPALAEIVPSMV 167
            E  F+   +  VI   +  S AG+ G R+SH +  +  ++  +  + A    + R++      P  FWTL   ++L ALG+K RPV  G   RR+  A + R +  KL + F+  DQ+GVAV+GGV+ + + A L  +    ++  D     N+  R   +   A+ VP +V
Sbjct:   42 ETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLV 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175151.4561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN3.300e-5049.44Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE7.860e-4146.63Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE2.360e-3946.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE5.330e-3946.63Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE9.730e-3946.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE2.010e-3245.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSY9_9PHAE9.350e-3145.52Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE2.030e-2944.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQE6_9PHAE1.850e-2341.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KT19_9PHAE7.580e-1530.23Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175151contigH-elongata_contig175151:336..917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175151.4561.1mRNA_H-elongata_contig175151.4561.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175151 336..917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175151.4561.1 ID=prot_H-elongata_contig175151.4561.1|Name=mRNA_H-elongata_contig175151.4561.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
MENLFEEATVKAVIKKANRQSAAGSSGLRYSHSQVALCDELVEDLAAFAA
LVFFSRVLPQVFWTLHTSANLSALGKKARPVACGDVLRRVFGAVSCRRYG
RKLADYFQPWDQYGVAVSGGVDIMVLTATLGFEDSCTILSYDRQTAFNSI
YRHRFLPALAEIVPSMVPYAFNLYAREPPKTSVCTRWWRFGSG*
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