prot_H-elongata_contig175058.4559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig175058.4559.1
Unique Nameprot_H-elongata_contig175058.4559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 3.410e-20
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEE 53
            +FIWE  SGRLVRA++AD QIVNCV PHPSLPV+ATSGLE+V R+WSP G EE
Sbjct:  750 VFIWERSSGRLVRAIKADDQIVNCVAPHPSLPVLATSGLESVARIWSPRGEEE 802          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A8C4RAR3_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RAR3_EPTBU)

HSP 1 Score: 73.9 bits (180), Expect = 2.770e-15
Identity = 28/52 (53.85%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAE 52
            +F+WE +SGRLV+ +EAD+ ++NC+ PHPS PV+ TSG++  V+LWSP   E
Sbjct:   32 VFVWELDSGRLVKLLEADNHVINCLQPHPSQPVIVTSGIDYDVKLWSPTSPE 83          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A8C4RBV7_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RBV7_EPTBU)

HSP 1 Score: 73.9 bits (180), Expect = 3.870e-15
Identity = 28/52 (53.85%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAE 52
            +F+WE +SGRLV+ +EAD+ ++NC+ PHPS PV+ TSG++  V+LWSP   E
Sbjct:   32 VFVWELDSGRLVKLLEADNHVINCLQPHPSQPVIVTSGIDYDVKLWSPTSPE 83          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A1V9ZAZ0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAZ0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.210e-14
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    2 FIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEEGSADDE 59
            ++W + +GRLV A  AD  IVNCV  HPSLPV+ATSG+E+VVRLWSPL   + S  DE
Sbjct:  580 YVWATATGRLVTAFRADEDIVNCVQGHPSLPVLATSGIESVVRLWSPLADVDVSPLDE 637          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A8K0KNQ7_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KNQ7_LADFU)

HSP 1 Score: 73.2 bits (178), Expect = 1.230e-14
Identity = 27/52 (51.92%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAE 52
            +F+WE ++GRLV  +EAD+ +VNC+ PHP+LP++ATSG++  V+LW+P+  E
Sbjct:   75 VFVWERDTGRLVMLLEADAHVVNCLQPHPTLPLLATSGIDYDVKLWAPIAPE 126          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A182IL99_9DIPT (Uncharacterized protein n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182IL99_9DIPT)

HSP 1 Score: 75.5 bits (184), Expect = 1.650e-14
Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEEGSADDE 59
            +F WE ESGRLV  +EAD+ +VNCV PHP+LP++A+SG++  V+LW+PL AEE   D++
Sbjct:  601 IFTWERESGRLVMLMEADNHVVNCVQPHPTLPLLASSGIDYDVKLWAPL-AEESCFDED 658          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A485LQN6_9STRA (Aste57867_24505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQN6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.080e-14
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    2 FIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPL 49
            +IWE ESG+LV A++AD  IVNCV  HP  P +ATSG+ENVVRLW+PL
Sbjct:  571 YIWEKESGQLVNALQADEDIVNCVQCHPFQPCLATSGIENVVRLWNPL 618          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: D0N9Z5_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N9Z5_PHYIT)

HSP 1 Score: 74.7 bits (182), Expect = 3.080e-14
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    3 IWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEEGSADD 58
            +W+  +G LV A+EAD+ IVNCV PHP    +ATSG+ENV+RLWSP   EE +  D
Sbjct:  589 VWDKATGELVNAIEADADIVNCVQPHPFDACLATSGIENVIRLWSPTSGEENTPTD 644          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A0B2UPU9_TOXCA (WD and tetratricopeptide repeats protein 1 n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2UPU9_TOXCA)

HSP 1 Score: 70.9 bits (172), Expect = 3.700e-14
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEEG 54
            + IWE +SG LV+A EAD  I+NCV PHP+  ++ATSG+E+V+R W PL  EEG
Sbjct:   22 LLIWERKSGALVKAFEADKNILNCVQPHPTTCLLATSGIEHVIRFWQPL-PEEG 74          
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Match: A0A6J0MIK7_RAPSA (DDB1- and CUL4-associated factor 8 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MIK7_RAPSA)

HSP 1 Score: 74.3 bits (181), Expect = 4.130e-14
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLGAEEGSADD 58
            +FIW+ +SG LVR +EAD  IVNC+ PHP LPV+A+SG+EN +++W+   AE  +  D
Sbjct:  347 IFIWKKKSGELVRVMEADRYIVNCIEPHPHLPVLASSGIENDIKVWTSKAAERATLPD 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig175058.4559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG3_ECTSI3.410e-2075.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8C4RAR3_EPTBU2.770e-1553.85Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
A0A8C4RBV7_EPTBU3.870e-1553.85Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
A0A1V9ZAZ0_9STRA1.210e-1460.34Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K0KNQ7_LADFU1.230e-1451.92Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A182IL99_9DIPT1.650e-1455.93Uncharacterized protein n=1 Tax=Anopheles atroparv... [more]
A0A485LQN6_9STRA3.080e-1466.67Aste57867_24505 protein n=1 Tax=Aphanomyces stella... [more]
D0N9Z5_PHYIT3.080e-1455.36Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A0B2UPU9_TOXCA3.700e-1457.41WD and tetratricopeptide repeats protein 1 n=1 Tax... [more]
A0A6J0MIK7_RAPSA4.130e-1451.72DDB1- and CUL4-associated factor 8 n=1 Tax=Raphanu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..56
e-value: 1.8E-6
score: 29.0
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 1..51
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..56
score: 10.97
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig175058contigH-elongata_contig175058:335..856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig175058.4559.1mRNA_H-elongata_contig175058.4559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig175058 335..859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig175058.4559.1 ID=prot_H-elongata_contig175058.4559.1|Name=mRNA_H-elongata_contig175058.4559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MFIWESESGRLVRAVEADSQIVNCVTPHPSLPVVATSGLENVVRLWSPLG
AEEGSADDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf