prot_H-elongata_contig17481.4548.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17481.4548.1
Unique Nameprot_H-elongata_contig17481.4548.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length482
Homology
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 3.250e-102
Identity = 204/401 (50.87%), Postives = 235/401 (58.60%), Query Frame = 0
Query:  135 NWTRQELEEWAAGDPAPPTPSVAVVD---------------------GSGAAKRPGKSARG--GPDAPVVTRVLPPGLETCRSEPPEFEPDPALRLERALCYTGGRRG---TVAFVG-GAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKD---------------EEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKF------DRGYAKDGIGDG-----GGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAFQRACHGIAG 482
            N T +ELE W   + AP TP VAV++                     G GAA+R G S  G  G D PVV+RVLPPGLE+ R +PPEF+PDPALRL+RALCYTGG      TV FVG GA F+AFPCNN+I+LMETPVMPE            LG    G + G+  EK+               ++P  +PH+FLRGHTDTVT L++S+AGHLLASAQGDPLGA GG GIVR+W+ +        D G A+   G       GGGGKC  HF  HRWGV+SMCFSSDDRLLCTVGGD+HRRTQ                                               RLVSCGRENVRFWR+RR HLPACPAVLNDFARDL CTDLAFQ +C GIAG
Sbjct:  534 NRTSEELEAWRGRETAPATPVVAVLNNGGERLTDGDXXXXXXXXXXXGLGAARRAGPSPSGVVGMDPPVVSRVLPPGLESSRPDPPEFDPDPALRLQRALCYTGGDLSGSTTVTFVGRGAEFMAFPCNNVIVLMETPVMPEAV---------FLGDGPAGMDEGVGAEKEAXXXXXXXRDGLLALQQPAPAPHIFLRGHTDTVTRLQLSHAGHLLASAQGDPLGAAGGHGIVRLWNATSLGRRSPADSGSARAAGGRRTPLREGGGGKCAAHFIAHRWGVSSMCFSSDDRLLCTVGGDDHRRTQ-----------------------------------------------RLVSCGRENVRFWRVRRRHLPACPAVLNDFARDLACTDLAFQSSCSGIAG 878          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A835YLQ5_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.020e-40
Identity = 113/309 (36.57%), Postives = 145/309 (46.93%), Query Frame = 0
Query:  204 ALRLERALCYTGGRRGTVAFVGGAAF-VAFPCNNIIILMETPVMPEFSRQGGENGDGS---LGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGG-KCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRR----------------------------------AVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAF 473
            A  L R L Y GG    +A+ G AA  +AFP    ++L         S +   +GDGS       +         +      +  H  L GH                          G G+ +VR+W V +     A D    GG  G +C+ H   H  G+ S+ FS+D+R LCTVGGD  RRTQV+VWDV +L AAR     G+  RR                                  A++ARQ+SDFP+ R+ FSPF   +LVSCGRENVRFWR+RR  LPACPAVLN++AR  ECTDLAF
Sbjct:  426 APALTRMLGYAGG---PIAWAGPAATALAFPSGGAVVLAAADAQRGSSAEYRSSGDGSSXXXXXXVDXXXXXXXADAVGAGGAPRHAVLHGHRTA----------------------GGAGEALVRLWRVPQAAT--AGDAARGGGQEGYRCVAHVAAHACGLRSLAFSADERALCTVGGDAQRRTQVIVWDVAVLMAARRA---GSGARRSQLMLPPLTYHVXXXXXXXXXXXXXXXXXXXXDAAILARQLSDFPVARVRFSPFHARQLVSCGRENVRFWRVRRKCLPACPAVLNEYARGAECTDLAF 704          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A397DVB1_9STRA (DUF667 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVB1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.240e-33
Identity = 99/282 (35.11%), Postives = 130/282 (46.10%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHL---FLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAFQRACHG 479
            P PAL L R + Y+  RR  +A+   ++   + C + +I+   P  P   +                           E  SSP +   FL GHTD VT L  S+A  LLASAQG      G    +R W +S                 G CI   + H  GV ++ F      LC VG D  RRTQ++VWDV         T     V    VA+Q++D+ I  I FSP E  RLVSCGRE++RFWR++ GHLP C  VL+++ARD   TDL F     G
Sbjct:  217 PSPALSLRRVIGYSVERRRALAWASTSSTFFYSCESTVIVGRRP--PPSGQS--------------------------ETTSSPFVDQEFLLGHTDDVTALAYSSAAGLLASAQG------GVSPSIRFWLLSPK---------------GHCIASVKAHAHGVDTIAFCPHGTQLCGVGHDSKRRTQILVWDV---------TTPSQPV---CVAKQLTDYAIANIKFSPHEPDRLVSCGRESIRFWRVKNGHLPGCAVVLHEYARDTLFTDLDFDPVVMG 437          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: W4GNL5_9STRA (DUF667 domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNL5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.140e-32
Identity = 98/282 (34.75%), Postives = 128/282 (45.39%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHL---FLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAFQRACHG 479
            P PAL L R + Y+  RR  +A+   ++   + C + +I+                             R        E  SSP +   FL GHTD VT L  S+A  LLASAQG      G    +R W +S                 G CI   + H  GV ++ F      LC VG D  RRTQ++VWDV         T     V    VA+Q++D+ I  I FSP E  RLVSCGRE++RFWR++ GHLP C  VL+++ARD   TDL F     G
Sbjct:  344 PSPALSLRRVIGYSVERRRALAWASTSSTFFYACESTVIV----------------------------GRXXXPSGQSETTSSPFVDQEFLLGHTDDVTALAYSSAAGLLASAQG------GVSPSIRFWLLSPK---------------GHCIASVKAHAHGVDTIAFCPHGTQLCGVGHDSKRRTQILVWDV---------TTPSQPV---CVAKQLTDYAIANIKFSPHEPDRLVSCGRESIRFWRVKNGHLPGCAVVLHEYARDTLFTDLDFDPVVMG 564          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A024TNJ4_9STRA (DUF667 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNJ4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.740e-32
Identity = 92/287 (32.06%), Postives = 127/287 (44.25%), Query Frame = 0
Query:  193 RSEPPEFEPDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAFQRACHG 479
            R+  P   P PAL L R + Y+   R  +A+   ++   +   + +I+      P                                P++    FL GHTD VT L  S    LL SAQG      G    VRIW ++                 G CI   + H  GV ++ FS +   LC VG D  RRTQ++VWDV                +  +VA+Q+ D+ I  + FSP E  RLVSCGRE++RFWR++ GHLP CP +L+++ARD   TDL F     G
Sbjct:  341 RAANPVVWPSPALTLRRVIGYSVLHRRALAWASASSMFFYASESTVIVGRRDGQPSLPSSSSTT----------------------SPVAIAQEFLLGHTDNVTALAYSPTASLLVSAQG------GLSPRVRIWLLTPK---------------GHCIASVKAHAQGVDALSFSRNGTQLCGVGKDYKRRTQILVWDVA------------TPTQPVLVAKQLCDYSIANMKFSPHEHDRLVSCGRESIRFWRVKAGHLPGCPVILHEYARDTWFTDLDFDPVVMG 572          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A2P4X056_9STRA (WD40 repeat-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X056_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.900e-32
Identity = 97/293 (33.11%), Postives = 143/293 (48.81%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMET------PVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDE-----EPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDR---LLCTVGGDEHRRTQVVVWDVGILFAARAGTVHG-AAVRRAVVARQISDFPITRIIFSPF---EKLRLVSCGRENVRFWRIR--RGHLPACPAVLNDFARDLECTDLAF 473
            PDP L L+R + ++      + +V   +   +  ++ II  E       P MP  SR G E           G NR  +  K         +++   +L GH   +  L V++ G LLASA+   L  G  Q  VR+WD+S  +                C+   +    GV ++CFS+  +   LLC VG DE  RTQ+ VWD   L   +  T+   AA   +++ARQ SDFPI R+ FSP+   ++  LVSCGREN+R+WR+    GHL  CP +LN+++R    TD+ F
Sbjct:  239 PDPILELDRIIGFSNDFPRMLLWVANRSACIYTSSSTIIFREFCDQSNGPNMPNSSRFGAE-----------GNNRSTDAVKSSLESIGSAIATREHYLYGHCAKICALAVTSNGRLLASAE---LPTGSKQNGVRLWDLSSHE----------------CLTVVKAQPKGVHALCFSTPLKRRLLLCVVGRDECFRTQIFVWDCSCLQHDKEDTLSATAAAAVSLLARQTSDFPIDRVAFSPYVQQDQFHLVSCGRENIRYWRVNPNTGHLTGCPVILNEYSRGTVFTDIGF 501          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A418ARZ7_9STRA (DUF667 domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ARZ7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.870e-32
Identity = 94/287 (32.75%), Postives = 129/287 (44.95%), Query Frame = 0
Query:  193 RSEPPEFEPDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAFQRACHG 479
            R+  P   P PAL L R + Y+   R  +A+   ++   +   + +I+                 DGS                   P++    FL GHTD VT L  S    LL SAQG      G    VRIW ++                 G CI   + H  GV ++ FS +   LC VG D  RRTQ++VWDV                +  +VA+Q+ D+ I  + FSP E  RLVSCGRE++RFWR++ GHLP CP +L+++ARD   TDL F     G
Sbjct:  227 RAANPVVWPSPALTLRRVIGYSVLHRRALAWASASSMFFYASESTVIVGRR--------------DGST----------------TSPVAIAQEFLLGHTDNVTALAYSPTASLLVSAQG------GLSPRVRIWLLTPK---------------GHCIASVKAHAQGVDALSFSRNGTQLCGVGKDYKRRTQILVWDVA------------TPTQPVLVAKQLCDYSIANMKFSPHEHDRLVSCGRESIRFWRVKAGHLPGCPVILHEYARDTWFTDLDFDPVVMG 450          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A485LFU9_9STRA (Aste57867_20150 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFU9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.660e-30
Identity = 84/273 (30.77%), Postives = 129/273 (47.25%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRGHLPACPAVLNDFARDLECTDLAF 473
            P P   L+R + ++ G R  V +   A+  AF C + +++                             R  E++     L +  L L GHTD +T +  S A  LLASAQ       G   +VR+W ++                 G C+     H  GV ++ F+   ++L  VG D  +R Q++VWD+       +           +VA+Q+ D  I+++ FSP E  RLVSCGRE++RFWRI+ GHLP+CP VL+++ARD+  TD+ F
Sbjct:  361 PTPVATLDRVVGFSCGHRDAVVWAHNASTFAFACESTVVV----------------------------GRRTEDDHGGHGLHTQELLL-GHTDDITTIAYSPASGLLASAQS------GATPLVRLWALAPK---------------GHCVATINAHAGGVLTLAFNPSGQMLSGVGKDAKQRVQLLVWDISTTSPPASKLPPPT-----LVAKQLCDVAISKLKFSPHEPDRLVSCGRESIRFWRIKAGHLPSCPVVLHEYARDVVFTDVDF 578          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: G4Z4M8_PHYSP (DUF667 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z4M8_PHYSP)

HSP 1 Score: 134 bits (337), Expect = 7.830e-30
Identity = 92/284 (32.39%), Postives = 143/284 (50.35%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILME---TPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDR---LLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPFEK---LRLVSCGRENVRFWRIR--RGHLPACPAVLNDFARDLECTDLAF 473
            PDP L L+R + ++      + ++   +   +  ++ II+ E     + P  S         ++ G++         E      ++   FL GH+ ++  L V++ G LLASA+  PL A    G VR+WD++  +                C+   +    GV ++CFSS  +   LLC VG DE  RTQ+ +WD   L   +     GAAV  +++ARQ SDFPI R+ FSP+E+     LVSCGREN+R+WR+    GHL  CP +LN+++R    TD+ F
Sbjct:  236 PDPILELDRVIGFSNDYSRMLLWLPDGSACVYTSSSAIIIREFCDEGMDPRRSATSQRVSTEAVKGSL---------ETTSSATATREHFLYGHSASICALAVASDGGLLASAE-VPLQAKNQNG-VRLWDLASRE----------------CVTVVKAQPKGVHALCFSSASKRRLLLCAVGRDECFRTQIFIWDCSCLRHGKKEAYSGAAV--SLMARQTSDFPIDRVAFSPYEQQDHYHLVSCGRENIRYWRVNPNTGHLTGCPVILNEYSRGTVFTDIGF 490          
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Match: A0A225W0N6_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W0N6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.400e-29
Identity = 98/292 (33.56%), Postives = 139/292 (47.60%), Query Frame = 0
Query:  201 PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILME------TPVMPEFSRQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHL-----FLRGHTDTVTLLRVSNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKCIVHFEGHRWGVTSMCFSSDDR---LLCTVGGDEHRRTQVVVWDVGILFAARAGTVHGAAVRRAVVARQISDFPITRIIFSPF---EKLRLVSCGRENVRFWRIR--RGHLPACPAVLNDFARDLECTDLAF 473
            PDP L L R + ++      + +V   +   +  ++ II  E       PV    SR  G+           G N   E  K     +S H+     FL GH   ++ L V++ G LLASA+   L     Q  VR+WD+S  +                CI   +    GV ++CFS+  +   LLC VG DE  RTQ+ VWD   L       + G A+  +++ARQ SDFPI RI FSP+   ++  LVSCGREN+R+WRI     HL  CP +LN+++R    TD+ F
Sbjct: 1168 PDPILELGRVIGFSNDFPRMLVWVPNGSACIYTSSSTIIFREFCDVNNDPVRLNASRTNGK-----------GINLSTEAVKGSVESTSSHISTQEHFLYGHCSAISALAVTSDGGLLASAE---LPTQTTQNGVRLWDLSSRE----------------CITVIKAQPKGVHALCFSAPLKRRILLCVVGRDECFRTQIFVWDCSSLRHDNEEALSGTAI--SLMARQTSDFPIDRIAFSPYVEQDQFHLVSCGRENIRYWRINPNTSHLTGCPVILNEYSRGTVFTDIGF 1427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17481.4548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNU2_9PHAE3.250e-10250.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLQ5_9STRA2.020e-4036.57DUF667 domain-containing protein n=1 Tax=Tribonema... [more]
A0A397DVB1_9STRA3.240e-3335.11DUF667 domain-containing protein (Fragment) n=1 Ta... [more]
W4GNL5_9STRA1.140e-3234.75DUF667 domain-containing protein n=11 Tax=Aphanomy... [more]
A0A024TNJ4_9STRA3.740e-3232.06DUF667 domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A2P4X056_9STRA6.900e-3233.11WD40 repeat-like protein n=1 Tax=Phytophthora palm... [more]
A0A418ARZ7_9STRA7.870e-3232.75DUF667 domain-containing protein (Fragment) n=1 Ta... [more]
A0A485LFU9_9STRA5.660e-3030.77Aste57867_20150 protein n=1 Tax=Aphanomyces stella... [more]
G4Z4M8_PHYSP7.830e-3032.39DUF667 domain-containing protein n=1 Tax=Phytophth... [more]
A0A225W0N6_9STRA1.400e-2933.56Cyclic nucleotide-binding domain-containing protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 409..446
e-value: 24.0
score: 8.3
coord: 281..328
e-value: 0.78
score: 17.7
coord: 347..390
e-value: 3.4E-5
score: 33.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 348..389
e-value: 0.0016
score: 19.2
coord: 288..328
e-value: 0.071
score: 14.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 264..478
e-value: 1.8E-21
score: 79.0
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 191..448
NoneNo IPR availableTMHMMTMhelixcoord: 219..241
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 287..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17481contigH-elongata_contig17481:4260..7383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17481.4548.1mRNA_H-elongata_contig17481.4548.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17481 160..7383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17481.4548.1 ID=prot_H-elongata_contig17481.4548.1|Name=mRNA_H-elongata_contig17481.4548.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=482bp
MSPATGSRSKSVGAGRCPHPSTPPHTTANVIATPTRTRPARALGAGHSAA
ATAATTPRSKTPSRFLRHRGHPPPSPVATKGKPPLSPTTCRRARDTPPSR
FRKKAFFCDEDGDNVGNGNRNGDANADDSDERSGNWTRQELEEWAAGDPA
PPTPSVAVVDGSGAAKRPGKSARGGPDAPVVTRVLPPGLETCRSEPPEFE
PDPALRLERALCYTGGRRGTVAFVGGAAFVAFPCNNIIILMETPVMPEFS
RQGGENGDGSLGGNIGGKNRGIEEEKDEEPLSSPHLFLRGHTDTVTLLRV
SNAGHLLASAQGDPLGAGGGQGIVRIWDVSKFDRGYAKDGIGDGGGGGKC
IVHFEGHRWGVTSMCFSSDDRLLCTVGGDEHRRTQVVVWDVGILFAARAG
TVHGAAVRRAVVARQISDFPITRIIFSPFEKLRLVSCGRENVRFWRIRRG
HLPACPAVLNDFARDLECTDLAFQRACHGIAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf