prot_H-elongata_contig174807.4547.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174807.4547.1
Unique Nameprot_H-elongata_contig174807.4547.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
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BLAST of mRNA_H-elongata_contig174807.4547.1 vs. uniprot
Match: D8LIH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH4_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 5.720e-7
Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    3 RQVSDQLLASTNDMLLNASAIGRCLQEMGAGFAD 36
            ++V D+++ASTN M+LNA+AIGRCLQEMG+G AD
Sbjct:  154 KRVCDEIVASTNHMILNATAIGRCLQEMGSGVAD 187
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BLAST of mRNA_H-elongata_contig174807.4547.1 vs. uniprot
Match: A0A6H5J880_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J880_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 8.330e-7
Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    3 RQVSDQLLASTNDMLLNASAIGRCLQEMGAGFAD 36
            ++V D+++ASTN M+LNA+AIGRCLQEMG+G AD
Sbjct:  457 KRVCDEIVASTNHMILNATAIGRCLQEMGSGVAD 490
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174807.4547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIH4_ECTSI5.720e-767.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J880_9PHAE8.330e-767.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174807contigH-elongata_contig174807:754..882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174807.4547.1mRNA_H-elongata_contig174807.4547.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174807 754..882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174807.4547.1 ID=prot_H-elongata_contig174807.4547.1|Name=mRNA_H-elongata_contig174807.4547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MKRQVSDQLLASTNDMLLNASAIGRCLQEMGAGFADVSAALA*
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