prot_H-elongata_contig174676.4544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174676.4544.1
Unique Nameprot_H-elongata_contig174676.4544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig174676.4544.1 vs. uniprot
Match: A0A6H5KWT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.470e-17
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:    1 YINLKSDNGEHDMASFVSCRPLSQKPRRK-----GRERLSPWYVLLKVCLPSTIGLVKEPQLLDEMYSRSAME 68
            Y+NLKS       +SFVS R LS++P R      G ERL PWYVLLKVCLPS +GL+KEP+LL ++YSR A E
Sbjct:  605 YVNLKS-KVRRWTSSFVSIRSLSKRPERAPEQRFGHERLPPWYVLLKVCLPSALGLIKEPELLQQLYSRKAAE 676
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BLAST of mRNA_H-elongata_contig174676.4544.1 vs. uniprot
Match: D7FN90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN90_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-16
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 0 
Query:    1 YINLKSDNGEHDMASFVSCRPLSQKPRRK-----GRERLSPWYVLLKVCLPSTIGLVKEPQLLDEMYSRSAME 68
            Y+NLKS       +SFVS R LS +P R      G E L PWYVLLKVCLPS +GL+KEP+LL ++YS+ A E
Sbjct:  130 YVNLKS-KVRRWTSSFVSIRSLSNRPERAHEQRVGHEHLPPWYVLLKVCLPSALGLIKEPELLQQLYSKKAAE 201
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174676.4544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWT1_9PHAE3.470e-1757.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN90_ECTSI1.080e-1654.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174676contigH-elongata_contig174676:105..1138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174676.4544.1mRNA_H-elongata_contig174676.4544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174676 105..1138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174676.4544.1 ID=prot_H-elongata_contig174676.4544.1|Name=mRNA_H-elongata_contig174676.4544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
YINLKSDNGEHDMASFVSCRPLSQKPRRKGRERLSPWYVLLKVCLPSTIG
LVKEPQLLDEMYSRSAME
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