prot_H-elongata_contig174643.4543.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174643.4543.1
Unique Nameprot_H-elongata_contig174643.4543.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length226
Homology
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.120e-40
Identity = 97/233 (41.63%), Postives = 142/233 (60.94%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVT------ERQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF+V YAPTE V       +  K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L NT+   P     G+   FQS+N+GK K  L++IL  QTDRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   64 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK---GGVQQTFQSSNKGKEKYCLDFILMRQTDRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 289          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.150e-40
Identity = 96/233 (41.20%), Postives = 140/233 (60.09%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF+V YAPTE V          K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  VLGAYGRD+ N NG+R+     +N+ +L NT++  P     G+ + FQS+N+GK K  L++IL  Q DRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCCDAK--VLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPK---GGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 3.830e-40
Identity = 96/233 (41.20%), Postives = 141/233 (60.52%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF++ YAPTE V          K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L NT++  P     G  + FQS+N GK K  L++IL  QTDRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK---GGAQHTFQSSNTGKEKYRLDFILMRQTDRRFVRDVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 4.450e-40
Identity = 95/233 (40.77%), Postives = 139/233 (59.66%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G+    +E I+ RL+K RL I ++  +TF+V YAPTE V          K  + TA +  +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L     N+L+L NT++  P     G+ + FQS+N+GK K  L++IL  Q DRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPK---GGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.260e-40
Identity = 97/233 (41.63%), Postives = 143/233 (61.37%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF+V YAPTE V          K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L NT++  P     G+ + FQS+N+GK K  L++IL  QTDRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK---GGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5JM04_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM04_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 5.780e-40
Identity = 96/233 (41.20%), Postives = 142/233 (60.94%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF+V YAPTE V          K  + TAP++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L +T +     R  G+ + FQS+N+GK K  L++IL  Q DRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTAPDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTSTCF-----RKCGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 255          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.070e-39
Identity = 97/233 (41.63%), Postives = 143/233 (61.37%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ + ++ G+    +E IS RL+K RL I ++  +TF+V YAPTE            K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L+NT++  P     G+ + FQS+N+GK K  L++IL  QTDRRLVR  N     +   +SDHNLV+  VR P   APNR
Sbjct:   32 GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPK---GGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVR--NASVKRVDFKDSDHNLVHTTVRSPPRVAPNR 257          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.100e-39
Identity = 97/233 (41.63%), Postives = 143/233 (61.37%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ + ++ G+    +E IS RL+K RL I ++  +TF+V YAPTE            K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L+NT++  P     G+ + FQS+N+GK K  L++IL  QTDRRLVR  N     +   +SDHNLV+  VR P   APNR
Sbjct:  144 GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPK---GGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVR--NASVKRVDFKDSDHNLVHTTVRSPPRVAPNR 369          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.410e-39
Identity = 95/233 (40.77%), Postives = 142/233 (60.94%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTERQ------KAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TFLV YAPTE V   +      K  + TA ++ +  V +R++ V L DANA TG+R +G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L NT++  P     G+ + FQS+N+GK K  L++I   Q DRR VR V+ +       +SDH LV   VR+P   APNR
Sbjct:  229 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK---GGVQHTFQSSNKGKEKYRLDFIFMRQADRRFVRNVSVKRVDF--KDSDHKLVLTTVRLPPRVAPNR 454          
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.790e-39
Identity = 96/233 (41.20%), Postives = 142/233 (60.94%), Query Frame = 0
Query:    2 GYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLLKARLSI-KSILITFLVVYAPTEEVTE------RQKAKYITAPNSIVLSVPAREY-VFLNDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLNTFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPPPLASSESDHNLVYAKVRIPRTSAPNR 226
            GY + +SG  +  K K+G H VG+AIK+ +  + G++   +E IS RL+K RL I ++  +TF+V YAPTE V          K  + TA ++ +  V +R++ V L DANA TG+R  G  +A+  ++GAYGRD+ N NG+R+L    +N+L+L NT++  P     G+ + FQS+N+GK K  L++IL  Q DRR VR V+ +       +SDHNLV   VR+P   APNR
Sbjct:  711 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAK--IMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK---GGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLVLTTVRLPPRVAPNR 936          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174643.4543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCV1_9PHAE1.120e-4041.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBZ6_9PHAE1.150e-4041.20Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KSV0_9PHAE3.830e-4041.20Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K259_9PHAE4.450e-4040.77Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5L7A7_9PHAE5.260e-4041.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM04_9PHAE5.780e-4041.20Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE2.070e-3941.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE2.100e-3941.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE2.410e-3940.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE2.790e-3941.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..218
e-value: 3.5E-13
score: 51.5
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 4..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174643contigH-elongata_contig174643:3..680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174643.4543.1mRNA_H-elongata_contig174643.4543.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174643 3..680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174643.4543.1 ID=prot_H-elongata_contig174643.4543.1|Name=mRNA_H-elongata_contig174643.4543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
SGYRVYFSGDCSEVKGKKGQHWVGLAIKKELVNNTGKDDIAIESISARLL
KARLSIKSILITFLVVYAPTEEVTERQKAKYITAPNSIVLSVPAREYVFL
NDANATTGKRSQGGKEAESTVLGAYGRDVDNENGKRMLSFVENNKLTLLN
TFYCLPPPRPNGLFYKFQSANRGKGKAGLEYILTEQTDRRLVRIVNFRPP
PLASSESDHNLVYAKVRIPRTSAPNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf