prot_H-elongata_contig174613.4541.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174613.4541.1
Unique Nameprot_H-elongata_contig174613.4541.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: D7FP17_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP17_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 4.520e-34
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            VLYDPS+T Y +LL +FF RHDPTQ NGQGNDKGTQYRAGVYFHD++Q+  AE FF DE   R LKK+ATELEE +EFYDAE+EHQQ
Sbjct:  224 VLYDPSETKYADLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKFFADEISARRLKKLATELEEVREFYDAEDEHQQ 310          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: D8SPA2_SELML (Peptide-methionine (S)-S-oxide reductase n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SPA2_SELML)

HSP 1 Score: 86.7 bits (213), Expect = 1.640e-19
Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            V YDP + +Y  LL  F+ +HDPTQA+GQGND G+QYR+G+YFH  EQ K A+   E E+++ G KKI TEL  A  FY AE+ HQQ
Sbjct:   55 VEYDPKEVSYTALLDAFWKKHDPTQADGQGNDIGSQYRSGIYFHTPEQEKLAKQSLEQEQQRLG-KKIVTELLPATTFYPAEDYHQQ 140          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: A0A2D9IS81_9RHOB (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2D9IS81_9RHOB)

HSP 1 Score: 87.0 bits (214), Expect = 2.150e-19
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRK---EAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            VL+DPS+ +Y  LL  F++ HDPTQ N QGND GTQYR+G Y+  D Q++   E +A +ED+ +K G   I TE+++A EF+ AE+ HQQ
Sbjct:   74 VLFDPSELSYLELLSTFWENHDPTQLNRQGNDIGTQYRSGAYYFSDTQKRILLETKAIYEDDLQKAGFSSIMTEIKKAPEFFIAEDYHQQ 163          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: UPI000401FF51 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Salinarimonas rosea TaxID=552063 RepID=UPI000401FF51)

HSP 1 Score: 86.7 bits (213), Expect = 5.520e-19
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAF---FEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            V+YDP++ +Y+ LL  FF+ HDPTQ   QGND GTQYR+GVY HDD QR+ AEA    ++   ++ G   I TE+ EA  FY AE+ HQQ
Sbjct:  101 VVYDPAEISYERLLEAFFESHDPTQGMRQGNDVGTQYRSGVYVHDDGQRRAAEAVRAAYDARLRENGFPAITTEIREAGPFYFAEDYHQQ 190          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: A0A835Z6G6_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6G6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.600e-19
Identity = 50/90 (55.56%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQVTS 90
            V YDP   +YK L+  FF R DPTQ NGQGND+GTQYR+GVYFH  EQ   A+  FE    K   + IATEL+ A  FY AE  HQQ  S
Sbjct:  160 VYYDPKQVSYKTLVEEFFSRVDPTQVNGQGNDRGTQYRSGVYFHTPEQEAAAKEVFE-RLAKENSRPIATELKAAAVFYPAEPYHQQYLS 248          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: UPI0019F27A28 (Peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F27A28)

HSP 1 Score: 85.1 bits (209), Expect = 8.430e-19
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEA---FFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            V+YDP   + K LL +F++ HDPTQ   QGND+GTQYR+G+Y  DD QRK AE+   FF+ E  K    +I TE+ +A EFY AE+ HQQ
Sbjct:   68 VVYDPEKISTKQLLKVFWESHDPTQGMQQGNDRGTQYRSGIYVFDDGQRKNAESTRDFFQQELAKNNYGQITTEILDAPEFYYAEDYHQQ 157          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: W2Q2P9_PHYPN (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q2P9_PHYPN)

HSP 1 Score: 84.3 bits (207), Expect = 1.080e-18
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQ 86
            ++YD S T+Y+ LL  F+  HDPT  N Q NDKGTQYR+G+Y+H ++QRK A A  E E +K  +K I TE+ EAK+F+DAE+ HQ
Sbjct:   52 IVYDESQTSYEALLNKFWAIHDPTTLNRQKNDKGTQYRSGIYYHSEDQRKAALASKE-EHQKTLIKPIVTEIMEAKQFWDAEDYHQ 136          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: A0A5N6LUS4_9ASTR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LUS4_9ASTR)

HSP 1 Score: 86.3 bits (212), Expect = 1.360e-18
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            V YDP + +Y+NLL  F++RHDPT  N QGND GTQYR+G+YF+  EQ K A    E  +KK   +KI TE+  AK+FY AEE HQQ
Sbjct:  142 VQYDPKECSYENLLDCFWERHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAALESMEKHQKKLN-RKIVTEILPAKKFYRAEEYHQQ 227          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: A0A523EHL8_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523EHL8_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 1.730e-18
Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    1 VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAF---FEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            V+YDP  TTY  LL +F++ HDPTQ   QGND+GTQYR+GVY +D EQR  AEA    +    +  G   I TEL +A EFY AE++HQQ
Sbjct:   77 VVYDPEKTTYDALLKIFWENHDPTQGMRQGNDRGTQYRSGVYVYDAEQRAAAEASRDAYRQTLESAGYDAITTELIDAPEFYFAEDDHQQ 166          
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Match: A9SML9_PHYPA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SML9_PHYPA)

HSP 1 Score: 84.0 bits (206), Expect = 1.930e-18
Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    3 YDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRKEAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQ 87
            YDPS  +YK LL +F+ +HDPTQ N QGND G+QYR+G+Y+H +EQ+ EA A  ++E+  R  K+IATE+  A  +Y AEE HQQ
Sbjct:   60 YDPSQVSYKQLLDVFWKKHDPTQKNRQGNDVGSQYRSGIYYHTEEQKVEAIASMKEEEA-RLKKQIATEILPATTYYLAEEYHQQ 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174613.4541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP17_ECTSI4.520e-3473.56Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
D8SPA2_SELML1.640e-1955.17Peptide-methionine (S)-S-oxide reductase n=4 Tax=S... [more]
A0A2D9IS81_9RHOB2.150e-1950.00Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI000401FF515.520e-1952.22peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A835Z6G6_9STRA6.600e-1955.56Peptide-methionine (S)-S-oxide reductase n=1 Tax=T... [more]
UPI0019F27A288.430e-1952.22Peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
W2Q2P9_PHYPN1.080e-1853.49Peptide-methionine (S)-S-oxide reductase n=1 Tax=P... [more]
A0A5N6LUS4_9ASTR1.360e-1855.17Peptide-methionine (S)-S-oxide reductase n=1 Tax=M... [more]
A0A523EHL8_9BACT1.730e-1853.33Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A9SML9_PHYPA1.930e-1854.12Peptide-methionine (S)-S-oxide reductase n=2 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002569Peptide methionine sulphoxide reductase MsrAPFAMPF01625PMSRcoord: 1..87
e-value: 1.4E-28
score: 100.0
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10coord: 1..90
e-value: 1.5E-31
score: 111.3
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 1..87
NoneNo IPR availablePANTHERPTHR42799FAMILY NOT NAMEDcoord: 1..87
NoneNo IPR availablePANTHERPTHR42799:SF2PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174613contigH-elongata_contig174613:450..1192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174613.4541.1mRNA_H-elongata_contig174613.4541.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174613 450..1192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174613.4541.1 ID=prot_H-elongata_contig174613.4541.1|Name=mRNA_H-elongata_contig174613.4541.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
VLYDPSDTTYKNLLGMFFDRHDPTQANGQGNDKGTQYRAGVYFHDDEQRK
EAEAFFEDEKKKRGLKKIATELEEAKEFYDAEEEHQQVTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA
IPR036509Met_Sox_Rdtase_MsrA_sf