prot_H-elongata_contig174546.4537.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174546.4537.1
Unique Nameprot_H-elongata_contig174546.4537.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig174546.4537.1 vs. uniprot
Match: UPI001AD8DC38 (uncharacterized protein LOC121052952 isoform X1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8DC38)

HSP 1 Score: 57.4 bits (137), Expect = 9.960e-7
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 0 
Query:   69 VGEEPWILDSGATGHFTHDGSRLAVYAE--CSRVLRGARGEAFPIVGTGVLTLCVRAGGGVVRVKLNDVAHAPGLFHHLLSLRRI 151
            VGE+ WI+DSGA+ H T+D S     +    S+V   A GEAFP++GTG + L          ++L++V + P L HHL+S+ ++
Sbjct:  348 VGEDTWIIDSGASDHMTYDKSYFTHLSPPPVSKVTN-ANGEAFPVLGTGSVRL-------TPTLELHNVLYVPALSHHLISVPQL 424
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BLAST of mRNA_H-elongata_contig174546.4537.1 vs. uniprot
Match: A0A5D3DSP6_CUCME (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DSP6_CUCME)

HSP 1 Score: 55.1 bits (131), Expect = 7.190e-6
Identity = 42/141 (29.79%), Postives = 61/141 (43.26%), Query Frame = 0 
Query:   14 CKKEEHNTVIAVGQVEE-LAPGDESPVSSDVELEAYTALTESKCLVSVGVESEHLRVGEEPWILDSGATGHFTHDGSRLAVYAECS--RVLRGARGEAFPIVGTGVLTLCVRAGGGVVRVKLNDVAHAPGLFHHLLSLRRI 151
            CKK+ H          + + P      S  + + A + +++S  L+SV         G  PWILDSGAT HFT        Y  C+    ++ A G   PI G G + L            L +V H P L ++LLS+ +I
Sbjct:  209 CKKQRHTKDPETANTSQPIGPTASQTSSPTLSVIAQSGMSQSFGLISVD--------GTNPWILDSGATDHFTSFSEHFVTYTSCAGNEKIQIADGSLAPIAGKGQIVL-------FDGFSLQNVLHVPKLSYNLLSISKI 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174546.4537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001AD8DC389.960e-738.82uncharacterized protein LOC121052952 isoform X1 n=... [more]
A0A5D3DSP6_CUCME7.190e-629.79Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1..16
score: 9.026

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174546contigH-elongata_contig174546:777..1241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174546.4537.1mRNA_H-elongata_contig174546.4537.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174546 777..1241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174546.4537.1 ID=prot_H-elongata_contig174546.4537.1|Name=mRNA_H-elongata_contig174546.4537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
CQGCGKKGHQVRQCKKEEHNTVIAVGQVEELAPGDESPVSSDVELEAYTA
LTESKCLVSVGVESEHLRVGEEPWILDSGATGHFTHDGSRLAVYAECSRV
LRGARGEAFPIVGTGVLTLCVRAGGGVVRVKLNDVAHAPGLFHHLLSLRR
IADAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC