prot_H-elongata_contig174301.4530.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig174301.4530.1
Unique Nameprot_H-elongata_contig174301.4530.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
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BLAST of mRNA_H-elongata_contig174301.4530.1 vs. uniprot
Match: A0A835Z8N4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.430e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0 
Query:    1 GHGRDVGRLAAHVVQAFMQEWLTCRWSEVKANPAEAFRTLFREAHESMLMSFREHLQALGWTLK 64
            GHGRDVGRLAA  V+ FMQ+WLT  WS V ANPAEAFR +F EAH SML +F++HL A GWT+K
Sbjct:   41 GHGRDVGRLAAVHVKGFMQDWLTRYWSAVIANPAEAFRIMFAEAHASMLTAFQQHLIAEGWTVK 104
[Close]
BLAST of mRNA_H-elongata_contig174301.4530.1 vs. uniprot
Match: D7FNA2_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA2_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 8.960e-19
Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 0 
Query:    1 GHGRDVGRLAAHVVQAFMQEWLTCRWSEVKANPAEAFRTLFREAHESMLMSFREHLQ 57
            GHGRDVGRLAAHVVQ FMQ+WL+ RW EVK NPAEAFRTLFRE +   LM  R   Q
Sbjct:  147 GHGRDVGRLAAHVVQEFMQDWLSRRWGEVKENPAEAFRTLFREDNGGYLMKRRSMTQ 203
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig174301.4530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z8N4_9STRA7.430e-2168.75Phosphatase 2C-like domain-containing protein n=1 ... [more]
D7FNA2_ECTSI8.960e-1971.93PPM-type phosphatase domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig174301contigH-elongata_contig174301:270..1178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig174301.4530.1mRNA_H-elongata_contig174301.4530.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig174301 270..1178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig174301.4530.1 ID=prot_H-elongata_contig174301.4530.1|Name=mRNA_H-elongata_contig174301.4530.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
GHGRDVGRLAAHVVQAFMQEWLTCRWSEVKANPAEAFRTLFREAHESMLM
SFREHLQALGWTLK
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