prot_H-elongata_contig171416.4402.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171416.4402.1
Unique Nameprot_H-elongata_contig171416.4402.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length401
Homology
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A6H5JTZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ5_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 3.950e-80
Identity = 154/407 (37.84%), Postives = 228/407 (56.02%), Query Frame = 0
Query:    1 STAAFHSALQEPDEYPG-FAVELWLTL-ENKLCDAYSDVSSNCVYSLFAIQDPNLNETSEDCQQTTDFQVNYLSDDKSFQVNFRHLEEGCKTFQTDTDTMTDETLGYPVHFMFSHRGISYGVASAGLLEFYINGSKIKIGVFYAMTGDDVMDAWHDSYIAQFLDHTRW-PWSTTFEGRRTKLHSAKIYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEIYDTDSDPTTPNYRDDPLPRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGAFPVRYRPVLNESSSS---AYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPVAFNLTLVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALYQVSVN 401
            +T      L   D  PG F++ELWL++ E   CD +      C   +  I + + +   +DCQQ     + Y ++   F   F  +++ C+   +       E++GY +H + +   I +         +YING+++   +   +  + +M  W   +  Q LD +R  P S   EG   K+    I+   L    + S Y+  + NSTPVV D  + + EDGE GDHY+DP  YLQVFP++EL+ + L++YD+D+DP TPNY +   PR FVN LP  G LV+S+G+D+ + PFE+ ++ GAF VRYRP+LN+ S++    Y  FSFYA DG +G RS  +ATV++YV  KNDPP A N +   +AG+REN I L G D D  D+V GA I E P+ G L+QV  N
Sbjct:   84 NTTLLREELLNDDSSPGHFSLELWLSVPEMPACDGF------CTTPIVTIGEGDTS-LDDDCQQNLGMMITYWTETGDFGARFMSIDDECERLWSGA-IQPSESMGYALHLVLTIDSIVFYGEPYAYFRWYINGTRVARDLSKDVPPETMMTLWDSDFNMQLLDWSRQIPSSFYTEGPGIKIFYLAIHDETLDVTEIVSRYSARVTNSTPVVSDTTIGVAEDGEEGDHYEDPQSYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNTLPFLGSLVNSSGDDISSVPFEVLEDAGAFAVRYRPILNDFSTNDSVVYANFSFYATDGESGTRSHTNATVSMYVFSKNDPPQALNASHGVFAGSRENFIPLNGTDMDAFDDVHGAAIVEPPARGTLFQVFNN 482          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A835ZCW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.660e-31
Identity = 83/218 (38.07%), Postives = 117/218 (53.67%), Query Frame = 0
Query:  184 IYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEIYDTDSDP--TTPNYRDDPLPRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGAFPVRYRPVLNES--SSSAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPVAFNLT-LVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALY 396
            +Y   L+   + + +   + NS P V +++ TI+EDGE+G HYD P  YL   P+ +L    L  YD +SDP  T      +P P  ++  LP  G L DS G  + T P ++ K      +RYRPV NES  + + Y  F++YAEDG TG +S  +ATVT+YVT  NDPPVA       A+ G +  ++ + G D D  D V  A +   P  G LY
Sbjct:    1 MYGKELTAEEITANFKAALPNSPPYVANVSFTISEDGELGSHYDTPEYYLAEVPVADLATFTLPAYDLESDPAATFVYNATNPPPVLYLTSLPSVGLLYDSQGAVIDTFPHQLAKST----LRYRPVANESRGTDTPYATFTYYAEDGSTGVKSPLNATVTLYVTAANDPPVASETEPFSAFTGVK-TMVCVTGTDIDAGDSVVSALVASAPQRGKLY 213          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A835ZFE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFE4_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.990e-28
Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 0
Query:  184 IYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEIYDTDSDP--TTPNYRDDPLPRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGAFPVRYRPVLNE--SSSSAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPVAFNLT-LVAYAGTRENIIYLEGLDRDDSDEVQGA 384
            +Y   L+   + + +   + NS P V +++ TI+EDGE+G HYD P  YL   P+ +L    L  YD + DP  T      +P P  ++  LP  G L DS G  + T P ++        +RYRPV NE   + + Y  F++YAEDG TG +S  +ATVT+YVT  NDPPVA       A+ G +  ++ + G D D  D V  A
Sbjct:    1 MYGKELNAEELTANFKAALPNSPPYVGNVSFTISEDGELGSHYDTPEYYLAEVPVADLATFTLPAYDLERDPAATFVYNATNPPPVLYLTSLPSVGMLYDSQGAVIDTFPHQLANGT----LRYRPVSNECRGTDTPYATFTYYAEDGSTGVKSPLNATVTLYVTAANDPPVASETEPFSAFTGVK-TMVCVTGTDIDAGDSVLSA 201          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A836CLP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 8.510e-27
Identity = 122/414 (29.47%), Postives = 182/414 (43.96%), Query Frame = 0
Query:   17 GFAVELWLTLENKLCDAYSDVSSNCVYSLFAIQDPNLNETSED---CQQTTDFQVNYLSDDKSFQVNFRHLEEGCKTFQTDTDTMTDET----LGYPVH----FMFSHRGISYGVASAGLLEFYINGSKIKIGVFYAMTGDDVMDA--------WHDSYIAQFLDHTRW--------PWSTTFEGRRTKLHSAKIYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEI-YDTDSDPTTP-NYRDDPL-PRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGAFPVRYRPVLNESSS--SAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPVAFNLTLVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALYQV 398
            GF +ELWL+      D   +   N + S+    D     T E+   C+Q ++ ++ Y+++D  F      +E       T T T +  T     G P H    F FS      G  +   + +Y NG  +       +T  ++  A        W   Y  Q     R         P+S  F      ++S  +Y   L+ A     Y   + NS PV  D+NVT++EDG +G+HY DPA +L   P+ +L  I L   YD +SDP    +Y    + P  ++  LP  G L  S G  + T+        GA  +R+RP  N  S+  +AY  F++ A D VT   S   ATVTIYVT ++DPP      + A AG  ++I    G D D  D V+   I   P++G LY++
Sbjct:  102 GFTMELWLSHGASFND---NAPFNTIMSIGTAVDVYQGPTVENNFYCEQNSNLELRYVAND--FYAVLLRMELTPTVACTPTTTSSAPTDGAAPGVPQHVVITFDFSRLQPETGSYAVVPVNYYFNGGDLN-AAHGGVTAPELFHARFNGFNSTWVPGYKLQMYSDYRTAADQMHAGPFSEMFTPWPGTMYSVALYPRVLTAAEAKGNYDAYVPNSPPVAADVNVTVDEDGMVGNHYADPAYFLSDVPVLDLATITLPAAYDYESDPANLLSYNASSVAPTLWLASLPTAGTLYTSAGVPI-TSVAAAPAVTGA--LRFRPARNAFSAGGAAYANFTYVARDSVTAALSAP-ATVTIYVTSQDDPPSVDAKAVAAVAGVAKSICG-SGSDVDAGDSVRNFYIASTPAHGQLYRM 504          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A835ZFY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.210e-19
Identity = 116/426 (27.23%), Postives = 169/426 (39.67%), Query Frame = 0
Query:   17 GFAVELWLTLENKLCDAYSDVSSNCVYSLFAIQDPNLNETSE---DCQQTTDFQVNYLSDDKSFQVNFRHLEE----GCKTFQTDTDTMTDETLGYPVHFM----FSHRGISYGVASAGLLEFYINGSKIKIG--------VFYAMTGDDVMDAWHDSYIAQFLDHTR---------------W--PWSTTFEGRRTKLHSAKIYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEI---YDTDSDPTTPNYRD-DPLPRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGAFPVRYRPVLNESSS--SAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPV--AFNLTLVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALYQV 398
            GF +E+WL+  +      +    N + S+     P ++  SE    C+  ++  + Y S    + + FR  E     G   F        +   G P H +     S      G  +   L +Y+NG  +             Y  T +     W  SY  Q     R               W  PW  T       + S  +Y   L+   + + Y   I N  PV    NVT+ EDG     YD PA Y    P  +L  I       Y++D+     +Y   +P P  ++  LP  G L    G  V +   +I        +RYRP  ++ S+  +AY  F + A DGVTG RS + ATVTI+VT ++DPPV  A  +T+ A   T+   I   G D D  D V+   I   PS+G LY V
Sbjct:  104 GFTLEMWLSHPSTF---RAPGFQNTLLSIGTATSPFVSAYSEWNLACEYCSNLDLAYSSKYMRYMLYFRRHETLIGTGTCAFNYSASHQYNAGPGVPQHVVVTVDLSAVQPETGNDTTIPLSWYLNGGDLNAANNGSTYNQSSYYATFNGFNSVWATSYKLQLFSDYRTAADQKHVGANGEDEWYAPWPGT-------IFSTALYPRVLNAKEIKANYDAYIPNVPPVPKAFNVTVLEDGMTAARYDTPAYYRADVPALDLATIAFPAPYDYESDAAANALSYSAANPAPTLWLASLPSRGTLYTLAGAAVTSAATQIANAT----LRYRPARDQFSAGGAAYATFRYVAADGVTGARSAE-ATVTIFVTAQDDPPVVVARAVTVAAAVATK---ICGNGTDVDAGDSVRNYYISTAPSSGKLYYV 511          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A4D9DDU0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDU0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.030e-18
Identity = 76/242 (31.40%), Postives = 110/242 (45.45%), Query Frame = 0
Query:  184 IYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEIYDTDSDPTTPNYRDDPLPRAFVNV----LPHTGYLVDSTGEDVM-TTPFEIQKEE---------GAFP--VRYRPVLNESS-SSAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPPVAFN---------LTLVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALYQVS 399
            +Y+  LS   +   YA  + NS P+V D +  + E+GE+G HYD P  YL   P+ EL  + L + D D DP++PNY     P  F  +    LP  G L    G  +  + P  +  E          G F   +R+RP   E S    YT F  +A DGVTG  S D AT+++YV   +  P+A N                  R   + LEG+       +  A +  LP++G LY+V+
Sbjct:   18 LYNRVLSPEEIAQNYAARVPNSPPIVQDASHVVQENGEVGSHYDTPEFYLSPVPVDELVSLTLVVLDGDHDPSSPNYNASASPITFPGLCLATLPANGTLYFMNGTAIHGSLPIALAVESPRGNGASLNGTFTTQLRFRPGWKEVSWPHIYTTFEVFAVDGVTGLAS-DTATISVYVKAVHQIPIAGNGSNHXXXXXXXXXXXMAARLTPVALEGIAYGGF-RIVSARVASLPTHGYLYRVN 257          
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Match: A0A7S2S441_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S441_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.540e-8
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 0
Query:  179 LHSAKIYSTYLSTATVPSIYAKGIANSTPVVYDLNVTINEDGEM--GDHYDDPALYLQVFPITELERIKLEIYDTDSDPTTPNY 260
            L+   ++   L      + +  G+ NS PVVY+LN T+NEDGE   G  Y  P  Y + FP+  L  +++ +YD D++P  PNY
Sbjct:   27 LYFVALFGEALDATDAATNFKAGLPNSRPVVYELNETVNEDGEKVCGASYSTPEDYEEEFPVGSLGTVEVLVYDQDNEPWYPNY 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171416.4402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JTZ5_9PHAE3.950e-8037.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCW4_9STRA2.660e-3138.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFE4_9STRA1.990e-2836.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLP6_9STRA8.510e-2729.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFY4_9STRA3.210e-1927.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DDU0_9STRA2.030e-1831.40Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2S441_9STRA1.540e-836.90Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171416contigH-elongata_contig171416:144..1346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171416.4402.1mRNA_H-elongata_contig171416.4402.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171416 144..1346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171416.4402.1 ID=prot_H-elongata_contig171416.4402.1|Name=mRNA_H-elongata_contig171416.4402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=401bp
STAAFHSALQEPDEYPGFAVELWLTLENKLCDAYSDVSSNCVYSLFAIQD
PNLNETSEDCQQTTDFQVNYLSDDKSFQVNFRHLEEGCKTFQTDTDTMTD
ETLGYPVHFMFSHRGISYGVASAGLLEFYINGSKIKIGVFYAMTGDDVMD
AWHDSYIAQFLDHTRWPWSTTFEGRRTKLHSAKIYSTYLSTATVPSIYAK
GIANSTPVVYDLNVTINEDGEMGDHYDDPALYLQVFPITELERIKLEIYD
TDSDPTTPNYRDDPLPRAFVNVLPHTGYLVDSTGEDVMTTPFEIQKEEGA
FPVRYRPVLNESSSSAYTEFSFYAEDGVTGGRSLDDATVTIYVTPKNDPP
VAFNLTLVAYAGTRENIIYLEGLDRDDSDEVQGADIFELPSNGALYQVSV
N
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