prot_H-elongata_contig171068.4387.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig171068.4387.1
Unique Nameprot_H-elongata_contig171068.4387.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 84.3 bits (207), Expect = 3.890e-17
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            L+  AA KD +  H D + A+L  D++EE+Y++ P  + +  G V RL KA+YGL QAGRCWN K    +A + F + K+DPC+F
Sbjct:  319 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIF 403          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 84.3 bits (207), Expect = 3.970e-17
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            L+  AA KD +  H D + A+L  D++EE+Y++ P  + +  G V RL KA+YGL QAGRCWN K    +A + F + K+DPC+F
Sbjct:  924 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIF 1008          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A0A9X2C2_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X2C2_LYGHE)

HSP 1 Score: 75.5 bits (184), Expect = 3.910e-15
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFP--GSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            LL  A   + +  H D + A+L  DI+EE+Y+  P E  +    G V RL+KA+YGL Q+GRCWNNK  S +  +G +Q  ADPC++
Sbjct:   75 LLSLAVQNNLDIEHMDVKTAYLYGDIEEEIYVLPPPELLEPAENGKVWRLHKAMYGLKQSGRCWNNKIDSVLRELGLKQSSADPCIY 161          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A0A9XEE3_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XEE3_LYGHE)

HSP 1 Score: 78.2 bits (191), Expect = 5.430e-15
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0
Query:   15 HFDAERAFLKADIDEELYIKIPDEY-QKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            H D + A+L  D+ EE+Y++ P E      G V RL KAIYGL QAGRCWN K CS +  + F++ +ADPC+F
Sbjct:   84 HLDVKTAYLYGDLGEEIYVRPPPELLNPAEGKVWRLRKAIYGLKQAGRCWNAKICSVLKKMKFKKSEADPCIF 156          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A146LHR9_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LHR9_LYGHE)

HSP 1 Score: 77.8 bits (190), Expect = 7.750e-15
Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            LL  AA+K+ +   FD   AFL   ++EE+YIK P+ +      V +LN+++YGL QA RCWN +F + +  IGF+Q  AD C+F
Sbjct:  338 LLSVAASKNMKLMQFDVSTAFLYGYLEEEIYIKQPEGFDDGSNKVCKLNRSLYGLKQAPRCWNQRFAAFLLKIGFKQSNADTCLF 422          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE)

HSP 1 Score: 77.4 bits (189), Expect = 1.070e-14
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFP-GSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            L   A  KD    H D + A+L+  ID+E+Y+  P+E +  P G V  L +A+YGL Q+GRCWN +  + M  +G +Q KADPC++
Sbjct:  455 LFALATKKDMNITHMDVKTAYLQGQIDKEIYVIPPEEMKNKPKGKVWLLKRAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCIY 540          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A8J6LHG9_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LHG9_TENMO)

HSP 1 Score: 77.4 bits (189), Expect = 1.090e-14
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    1 MLLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            M+L  AA++    R FD + AFL  +IDE LY++ PD YQ     V +LN+++YGL QA RCWN +F S ++ +G     AD CVF
Sbjct:  293 MILCVAASEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGLHPTNADACVF 378          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO)

HSP 1 Score: 75.5 bits (184), Expect = 4.980e-14
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 MLLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            M+L  A ++    R FD + AFL  +IDE LY++ PD YQ     V +LN+++YGL QA RCWN +F S ++ +G     AD CVF
Sbjct:  228 MILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGLHPTNADVCVF 313          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A443RUL6_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443RUL6_9ACAR)

HSP 1 Score: 74.3 bits (181), Expect = 7.160e-14
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    2 LLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            +L  AA +D E   FD + AFL  +++EE++++ P  Y    G V RL K++YGL QA RCWN KF S +   G  + KAD CV+
Sbjct:   87 ILAIAAHEDMELVQFDVKTAFLHGELEEEIFMEQPIGYNDNSGRVCRLQKSLYGLKQAPRCWNEKFHSFLKQFGLNRSKADNCVY 171          
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Match: A0A2R6QB41_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6QB41_9APHY)

HSP 1 Score: 71.6 bits (174), Expect = 7.350e-14
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    7 AAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVG---RLNKAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF 86
            A +D E    D   A+L+ D+DEE+Y+K+P+  ++ PG  G   RL KA+YGL Q+GR W  K    MA +GFE+G+AD C++
Sbjct:    5 ANQDWELHQVDVVGAYLQGDLDEEIYMKLPEGIKE-PGKEGWCWRLKKALYGLKQSGRQWKKKLDEAMAKLGFEKGQADECLY 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig171068.4387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5GI29_9HEMI3.890e-1744.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI3.970e-1744.71Integrase catalytic domain-containing protein (Fra... [more]
A0A0A9X2C2_LYGHE3.910e-1543.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9XEE3_LYGHE5.430e-1549.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A146LHR9_LYGHE7.750e-1543.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A8I6TLX8_CIMLE1.070e-1441.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6LHG9_TENMO1.090e-1445.35Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A8J6LFP5_TENMO4.980e-1444.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A443RUL6_9ACAR7.160e-1443.53Integrase core domain protein-like protein (Fragme... [more]
A0A2R6QB41_9APHY7.350e-1444.58Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..82
e-value: 3.6E-15
score: 56.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig171068contigH-elongata_contig171068:1101..1358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig171068.4387.1mRNA_H-elongata_contig171068.4387.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig171068 854..1358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig171068.4387.1 ID=prot_H-elongata_contig171068.4387.1|Name=mRNA_H-elongata_contig171068.4387.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MLLVTAAAKDDEQRHFDAERAFLKADIDEELYIKIPDEYQKFPGSVGRLN
KAIYGLVQAGRCWNNKFCSDMAAIGFEQGKADPCVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2