prot_H-elongata_contig170572.4365.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig170572.4365.1
Unique Nameprot_H-elongata_contig170572.4365.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
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BLAST of mRNA_H-elongata_contig170572.4365.1 vs. uniprot
Match: D8LMI6_ECTSI (Glycolipid 2-alpha-mannosyltransferase, N-terminal, family GT15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI6_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.870e-35
Identity = 54/68 (79.41%), Postives = 63/68 (92.65%), Query Frame = 0 
Query:    1 IVPVPIYFVEVEFKLPDWMEPLSWIYPLAVKHFTGHPRSHPLVGFHSDMHGMLPYVKRGSFGYFHMCR 68
            +VPVPI+FV+V FKLPDWMEPLSW+YPLAVK FTGHP+S P+VG+HS+M G+LPYVKRG FGYFHMCR
Sbjct:  272 MVPVPIHFVKVAFKLPDWMEPLSWVYPLAVKQFTGHPKSEPVVGYHSEMRGLLPYVKRGGFGYFHMCR 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig170572.4365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMI6_ECTSI3.870e-3579.41Glycolipid 2-alpha-mannosyltransferase, N-terminal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig170572contigH-elongata_contig170572:317..922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig170572.4365.1mRNA_H-elongata_contig170572.4365.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig170572 317..922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig170572.4365.1 ID=prot_H-elongata_contig170572.4365.1|Name=mRNA_H-elongata_contig170572.4365.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
IVPVPIYFVEVEFKLPDWMEPLSWIYPLAVKHFTGHPRSHPLVGFHSDMH
GMLPYVKRGSFGYFHMCR*
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