prot_H-elongata_contig16965.4322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16965.4322.1
Unique Nameprot_H-elongata_contig16965.4322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.240e-80
Identity = 134/198 (67.68%), Postives = 163/198 (82.32%), Query Frame = 0
Query:   14 QRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            +R IT LI+LNT+ LA+DHHP+DEE +T L+  N  FTLCFA+EM +KL ALG RGYA+D+FNLFDGL+V+SSLVEL + PP  L+GG   E   GGLSALR+FRVLR+ KLAR W SMR+LL TL +T++D+GNF LLL+LFMFIY LIG+QFFANRLHFAEDG  +GIG EGY +AEVPR NFD+LL+AFTT+F V
Sbjct:  226 KRSITTLIILNTLTLALDHHPMDEEFSTVLDLLNLVFTLCFALEMALKLVALGPRGYAKDKFNLFDGLVVLSSLVELAIWPPDILTGGDG-EDWGGGLSALRSFRVLRILKLARGWSSMRDLLETLRKTLLDIGNFALLLLLFMFIYVLIGVQFFANRLHFAEDGRVIGIGEEGYYDAEVPRSNFDTLLHAFTTVFEV 422          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 4.560e-79
Identity = 131/197 (66.50%), Postives = 163/197 (82.74%), Query Frame = 0
Query:   15 RLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            R IT LI+LNT+ LA+DHHP+D++ +T L+  N  FTLCFA+EM +KL ALG RGYA+D+FNLFDGL+V+SSLVEL + PP+ L+GG   E   GGLSALR+FRVLR+ KLAR W SMR+LL TL +T++D+GNF LLL+LFMFIY LIG+QFFANRLHFAEDG  +GIG EGY +A+VPR NFD+LL+AFTT+F V
Sbjct:  613 RSITTLIILNTLTLALDHHPMDDDFSTVLDLLNLVFTLCFALEMALKLVALGPRGYAKDKFNLFDGLVVLSSLVELAIWPPNILTGGEG-EDWGGGLSALRSFRVLRILKLARGWSSMRDLLETLRKTLLDIGNFALLLLLFMFIYVLIGVQFFANRLHFAEDGRVIGIGEEGYYDAKVPRSNFDTLLHAFTTVFEV 808          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 4.880e-70
Identity = 123/198 (62.12%), Postives = 148/198 (74.75%), Query Frame = 0
Query:   14 QRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            Q  IT+LIVLNT+VLA+DHHP+DEE +TYLE FNFAF+LCF +EM +K+AALG R YA+D FNLFDG IVIS L+ELILSPP  L+G +                     KLAR W SMRELL TL +T++D+GNFG+LL+LFM+IY+L+GLQFFANR HF E G  VGIG  GY  AEVPR NFD+L+NAFTTIF +
Sbjct:  494 QNSITLLIVLNTLVLALDHHPMDEEFSTYLEVFNFAFSLCFMLEMALKVAALGPREYAKDNFNLFDGFIVISGLLELILSPPDILTGETG-NXXXXXXXXXXXXXXXXXXKLAREWHSMRELLNTLGKTLLDIGNFGMLLVLFMYIYALVGLQFFANRFHFNEVGEVVGIGEPGYYTAEVPRSNFDTLMNAFTTIFEI 690          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.230e-60
Identity = 110/187 (58.82%), Postives = 132/187 (70.59%), Query Frame = 0
Query:   31 DHHPLDEEIATYLEAFNFAFTLCFAIEMVIK-----LAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVVS 212
            DHHP+DEE +TY+E FNFAF+LCF +EM +K     +AALG R YA+D FNLFDG IVIS L+ELILSPP  L+G +                     KLAR W SMRELL TL +T++D+GNFG+LL+LFM+IY+L+GLQFFANR  F E G  VGIG  GY  AEVPR NFD+L+NAFTTIF  S
Sbjct:    2 DHHPMDEEFSTYVEVFNFAFSLCFMLEMALKVGLYRIAALGPREYAKDNFNLFDGFIVISGLLELILSPPDILTGETG-NXXXXXXXXXXXXXXXXXXKLAREWHSMRELLNTLGKTLLDIGNFGMLLVLFMYIYALVGLQFFANRFRFNEVGEVVGIGEPGYYTAEVPRSNFDTLMNAFTTIFEAS 187          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A8K1CR88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR88_PYTOL)

HSP 1 Score: 187 bits (475), Expect = 4.230e-51
Identity = 94/201 (46.77%), Postives = 139/201 (69.15%), Query Frame = 0
Query:   11 PFVQRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            P     I + IV NT +LA+DH+P+   + + LE  NF  +  F +EMV+KL  LG R YA D+FN+FD  +VI+ L+E I +PPSF+S  S+++   G +SALR+FR+ RVFKLAR+W+S+RELL  ++R +  + NFG+LL LF++IY+LIGLQ F N + F ++G+A+ +    + E E+PR NFD+LL +  T+F V
Sbjct:  697 PIFSGFIMLAIVANTTILALDHYPMPPGLDSDLEIVNFGLSCVFMLEMVLKLIGLGLRQYARDKFNVFDAFVVITGLLETIATPPSFMS--SNVKKKKGAVSALRSFRLSRVFKLARNWRSLRELLQLIARAVASIANFGVLLFLFIYIYALIGLQIFGNTMRFDDEGYAIPMDSPTFWEGELPRNNFDTLLWSMITVFQV 895          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A2D4C0A0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0A0_PYTIN)

HSP 1 Score: 186 bits (473), Expect = 7.750e-51
Identity = 98/201 (48.76%), Postives = 135/201 (67.16%), Query Frame = 0
Query:   11 PFVQRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            P    +I V+I  NT+VLA+DH+P+   +   LE  NF  +  F +EMV+KL  LG + YA D+FN+FD  IV   ++E + +PPSFLS  SS  +  GG+SALR+FR+ RVFKLAR+W S+RELL  + R +  +GNF +LL +F++IY+LIGLQFFAN L F +DG+ +      + +  VPR NFDSLL A  T+F V
Sbjct:  438 PIFGAIIMVVITANTIVLALDHYPMPPALDNDLEIINFGLSCVFLLEMVLKLFGLGLKQYARDQFNIFDAFIVTMGVLETVATPPSFLS--SSNTTKRGGVSALRSFRLFRVFKLARNWSSLRELLALIVRAVASIGNFAVLLSIFIYIYALIGLQFFANTLRFDKDGYPINNKDPTFWQGTVPRNNFDSLLWAVQTVFQV 636          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: D0N7Y8_PHYIT (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N7Y8_PHYIT)

HSP 1 Score: 173 bits (439), Expect = 4.670e-48
Identity = 83/188 (44.15%), Postives = 125/188 (66.49%), Query Frame = 0
Query:   24 NTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            NT VL++DH+P+ + +   LE  NFA T  F  EM++K+A LG   Y  D+FNLFD  +V+  L+E+ LSPPSF+S     +   G +++LR+FR+LRVFKLAR+WKS+RELL  + R +  + NFG+LL +F++IY+L+G+QFF N + F  +G+     +  Y    VPR +FD+ L +  T+F +
Sbjct:  291 NTAVLSMDHYPMSDTMDADLEIINFALTCVFVAEMIMKVAGLGIHLYTRDKFNLFDAFVVLMGLLEMALSPPSFMSEN---QPKKGSVASLRSFRLLRVFKLARNWKSLRELLEMVGRALASIANFGVLLFIFIYIYALVGMQFFGNTMRFDSNGYPTPYNIYDYWSGTVPRLHFDTFLWSAITVFKI 475          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A5A8D1B5_CAFRO (Ion_trans domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D1B5_CAFRO)

HSP 1 Score: 172 bits (435), Expect = 5.020e-48
Identity = 92/196 (46.94%), Postives = 135/196 (68.88%), Query Frame = 0
Query:   17 ITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHF-AEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            I + I++NTVVLA+D +P+D E A   E  NF  ++ F +EM++KLAA+G R Y++D FN+FD +IVI S+VE+ +SPP FL GGS+  +  GG+SALRTFR+LR+ KLAR+W S+R LL T+  ++ +VGNF  + +LF+ + +L G   FANR  F A+ G ++ +    ++ AE    NFD L +AF  +FVV
Sbjct:   75 IVLAILVNTVVLALDSYPVDTERARVAEILNFILSVVFLLEMLLKLAAMGPRAYSQDAFNVFDAVIVIISVVEVAVSPPVFL-GGSAAGTDAGGVSALRTFRLLRILKLARAWVSLRVLLATVLASLSEVGNFAAVTLLFVMVIALFGAFSFANRFRFNAKTGQSLAMTDPAFSSAEPSPINFDDLWSAFVAVFVV 269          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: G4YKH5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YKH5_PHYSP)

HSP 1 Score: 177 bits (450), Expect = 9.400e-48
Identity = 89/194 (45.88%), Postives = 137/194 (70.62%), Query Frame = 0
Query:   18 TVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            T+LI+LNT++L++D +P+D+++   +E  NFA TL F IE ++K++ LG +G+  DR+NLFD ++++ S  E+ILSPP+F+   S+  S T   S LR+FR+  +FKLARSW S+++LLTT+  T+ +VGNF +L +LF++IY+LIG+Q FANR  F E G  V      +  A VPR NFD++L +  T+F +
Sbjct:  356 TILILLNTIILSLDQYPIDQKLNETVEKINFALTLAFIIEALLKVSGLGWKGWVADRYNLFDAMVIVVSATEMILSPPTFIHQQSTT-SKTASFSGLRSFRLFALFKLARSWPSLQKLLTTMISTLHEVGNFCVLFLLFLYIYALIGMQTFANRFRFDEYGFPVD---RNHEAAYVPRANFDTMLWSVVTVFQI 545          
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Match: A0A329SQS1_9STRA (Sodium channel protein type 4 subunit alpha B n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQS1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 4.460e-47
Identity = 86/201 (42.79%), Postives = 128/201 (63.68%), Query Frame = 0
Query:   11 PFVQRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAFTLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSGGSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFGLLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDSLLNAFTTIFVV 211
            P    ++  +I  NT VL++DH+P+   +   LE  NFA T  F  EM+IK+A LG   Y  D+FNLFD  +V+  L+E+ LSPPSF+S     +   G +S+LR+FR+LRVFKLAR+W+S+RELL  +   +  + NFG+LL +F++IY+L+G+QFF N + F  +G+     +  Y    VPR NFD+ L +  T+F +
Sbjct:  486 PVFSSVVMYIIFANTAVLSLDHYPMSGTMDADLEIINFALTCVFVAEMIIKVAGLGIHLYTRDKFNLFDAFVVLMGLLEMALSPPSFMSEN---QPKKGSVSSLRSFRLLRVFKLARNWRSLRELLEMVGHALASIANFGVLLFIFIYIYALVGMQFFGNTMRFDSNGYPTPYNINDYWSGTVPRLNFDTFLWSTITVFKI 683          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16965.4322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI93_ECTSI1.240e-8067.68Similar to sodium channel, voltage-gated, type IX,... [more]
A0A6H5KPD7_9PHAE4.560e-7966.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVE6_ECTSI4.880e-7062.12Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
A0A6H5JIB7_9PHAE2.230e-6058.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1CR88_PYTOL4.230e-5146.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C0A0_PYTIN7.750e-5148.76Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0N7Y8_PHYIT4.670e-4844.15Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A5A8D1B5_CAFRO5.020e-4846.94Ion_trans domain-containing protein n=1 Tax=Cafete... [more]
G4YKH5_PHYSP9.400e-4845.88Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A329SQS1_9STRA4.460e-4742.79Sodium channel protein type 4 subunit alpha B n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00169KCHANNELcoord: 116..142
score: 39.02
coord: 5..33
score: 17.35
coord: 70..90
score: 17.62
NoneNo IPR availableGENE3D1.10.287.70coord: 133..213
e-value: 1.3E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 11..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..213
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..29
score: 0.504
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 11..210
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 12..30
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 9..132
e-value: 1.8E-28
score: 100.9
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 13..211
e-value: 1.3E-41
score: 142.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16965contigH-elongata_contig16965:6247..7449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16965.4322.1mRNA_H-elongata_contig16965.4322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16965 6247..7449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16965.4322.1 ID=prot_H-elongata_contig16965.4322.1|Name=mRNA_H-elongata_contig16965.4322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
RLSCPPSLCPPFVQRLITVLIVLNTVVLAIDHHPLDEEIATYLEAFNFAF
TLCFAIEMVIKLAALGARGYAEDRFNLFDGLIVISSLVELILSPPSFLSG
GSSLESSTGGLSALRTFRVLRVFKLARSWKSMRELLTTLSRTIVDVGNFG
LLLILFMFIYSLIGLQFFANRLHFAEDGHAVGIGVEGYNEAEVPRCNFDS
LLNAFTTIFVVSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf
IPR005821Ion_trans_dom