prot_H-elongata_contig168943.4288.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168943.4288.1
Unique Nameprot_H-elongata_contig168943.4288.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig168943.4288.1 vs. uniprot
Match: A0A6H5JD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD01_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.110e-19
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 DKFLPYFDFIGDFNHVQEHSEELLRRAGLWDEFGASGWGPDGKNAFFQR 49
            DKFLPYFDF+GDF HVQEHSEE L+RAGLW EFGASGWG  G+ AFFQR
Sbjct:  950 DKFLPYFDFVGDFKHVQEHSEEFLKRAGLWKEFGASGWGRWGQAAFFQR 998          
BLAST of mRNA_H-elongata_contig168943.4288.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 7.170e-19
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 DKFLPYFDFIGDFNHVQEHSEELLRRAGLWDEFGASGWGPDGKNAFFQ 48
            DKFLPYFDF+GDF HVQEHSEE L+RAGLW++FGASGWG  G+ AFFQ
Sbjct:  873 DKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920          
BLAST of mRNA_H-elongata_contig168943.4288.1 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.660e-9
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 DKFLPYFDFIGDFNHVQEHSEELLRRAGLWDEFGASGWGPD 41
            DKFLPY +FI ++  VQ H  E+L + G+W+++GASGWG D
Sbjct:  769 DKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWGRD 809          
BLAST of mRNA_H-elongata_contig168943.4288.1 vs. uniprot
Match: A0A7S2WKE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKE2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 6.860e-5
Identity = 19/41 (46.34%), Postives = 24/41 (58.54%), Query Frame = 0
Query:    7 FDFIGDFNHVQEHSEELLRRAGLWDEFGASGWGPDGKNAFF 47
            + F G+F  + EH    L +AGLW EFG SGWGP    + F
Sbjct:  102 YSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPGENVSMF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168943.4288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JD01_9PHAE1.110e-1981.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIV5_ECTSI7.170e-1979.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YWJ0_9STRA7.660e-953.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WKE2_9STRA6.860e-546.34Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168943contigH-elongata_contig168943:1042..1257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168943.4288.1mRNA_H-elongata_contig168943.4288.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168943 1042..1257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168943.4288.1 ID=prot_H-elongata_contig168943.4288.1|Name=mRNA_H-elongata_contig168943.4288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
DKFLPYFDFIGDFNHVQEHSEELLRRAGLWDEFGASGWGPDGKNAFFQRW
GVCVGGGRGCRRGSCKTMKGFV
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