prot_H-elongata_contig16793.4237.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16793.4237.1
Unique Nameprot_H-elongata_contig16793.4237.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length779
Homology
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 6.160e-65
Identity = 208/670 (31.04%), Postives = 302/670 (45.07%), Query Frame = 0
Query:   16 IDLRKVVFIGHSGAGKTSLIKSIKAGEG--RLALEEELESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLDKNKE-----LENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLADLQDRLKKYGEGMQWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRK--RSWIPLEELRLHWACVNNSPVINLPAKLRSD-------DPEFTLQSVMDMRERGGSLLK--HPEVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFG-ALPHQTFD----VLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLR--ADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVKDSKGRFPGDPIIRPGAIHHCRCQEE-------VASRLGTVL----PPSSPLENV 649
            + L KVV +G S AGKTSL+ SI  G G   +    E+ +VG+ +  H  +      T V  YD AG+V++YG+HQ FLT RALY+LVWD  R   K  +     +   +  WL  L  RAP STV+L A   +KC  S                    A VE  +    ++ +  R  S   + ++  +   SS  +C    GL ++ DR+          +PP+W LA+  LDA+RD  +P +A R  ++      V + R+  RS+     L   W  V    V N+  +LRSD       DP+  ++  + + E  G +L+  + + VFLDV   + +L PIL+HK   +       FAG R E          LV  GIL   FAE LW +     +P +  D    V+V LG+ LPL   S  PG  R L+    N +     ++ LV+MRLP+    E   +    +++R  +D  V   W F     P+GLVER++ASCH +G V    CWR GA F +   A           +    S+  N R    L ++ FG  +   VW ALR+V S+  +   D+PG+ W+    C +      +F    K S G F             C C          V  RLG V+    PP+S +E V
Sbjct:  221 LKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQG-----TAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVA---NKCDGSI------------EDFTGTAAVVEERVAVLRKEWRKARGFSSTRMDMDMTVLERSSLVSCLDGVGLQEMIDRIAAQSAASM-RVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREPGRSFFTENSLVEQWKGV----VQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQH--FAGMRNE----------LVHNGILRIAFAEHLWSDVMEITVPEEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISR----QDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSDRLYTFVVRYDSAVGNERR--ILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPPASDVEGV 847          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 9.240e-60
Identity = 202/687 (29.40%), Postives = 316/687 (46.00%), Query Frame = 0
Query:   16 IDLRKVVFIGHSGAGKTSLIKSI--KAGEGRLALEEELESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLDK-----NKELENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSER-STSVESLKLEYGIQLISSSPTCYGENGLADLQDRLKKYGEGMQWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSWIPLEELRLHWACVNNSPVINLPAKLRS-------DDPEFTLQSVMDMRERGGSLLK--HPEVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTF-----DVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHV--KEFLVLMRLP----QNAPCETRARFDAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGS---FALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVKDSKGRFPGDPIIRPG----AIHHCRCQEEVASRLGTVLPPSSPLENVFEPESEGEQGHVSFDEDG 667
            +++ KVV IG  GAGKTSL+ SI  + G   +   EE+ +VG+ ++ H   NG      V  YD AG+V++YG+HQ FLT RALY+LVWD SR   K     +K +   + +WL  L  R P S VLL A   +KC  S             +        VE S +   ++ +  R S  V  L +     L+S    C    GL+++  R+   G     ++PPSW LA+  LDA+RD  +P  A RR ++ +    V + +  S++    L   W    N  V ++  +L S        D    ++  + + E  G +L+  H +V+FLDV   + +L PIL+HK +         F    L      + +++LV  G+L  +FAE+LW  +  A P +        VL  LG+ LPL  +       R  + A     +   +  ++ LV+MRLP    +N   E +      ++      V  +W F      HGLVER++ASCH +G+V    CWR GA F ++  A D  GG    ++  +++ +   S  R    L V  FG      +W ALR+V S+  ++   +PG+ W+    C  H    ++F   ++    R  GDPI+       A + C C     + +  VL     L  + + + +   GH+  DE G
Sbjct:  382 LNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNG----RIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVA---NKCDGSL------------QEFVGTAGAVESSARRQLQEWQGNRKSPGVTKLTILQQPSLVS----CDDGGGLSEVIARVDAQG-ATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRW----NDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESH------FFPRSELT-----AMKDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREE------RHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIE---ARI-GDPILTDPDPRTAPNVCDCYTTEGNAMRLVL---ERLGTIIDTQKDDPFGHLHHDEGG 1011          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.920e-54
Identity = 193/658 (29.33%), Postives = 302/658 (45.90%), Query Frame = 0
Query:    1 MKRYYGELGKTQPVLID-----LRKVVFIGHSGAGKTSLIKSIKAGEGRLA--LEEELESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFL---DKNKELENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLIS----SSPTCYGENGLADLQDRLKKYGEGMQWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHP---VESTRKRSWIPLEELRLHWACVNNSPVINLPAKLRSDDPEFTLQSVMDMRERGGSLLKHP--EVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQT-------FDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNT-TSWRHVK---EFLVLMRLPQNAPCETRARFDAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVKDSKGRFPGDPIIRPGAIHHCRC 628
            +KRY  ++ + +    D     L KVV +G + AGKTSL+ SI AG G        +  +VG+ ++  + ++     T V  +D AG+V++ G+HQ FLT RALY+LV D +++    D +K + + +  WL  L  RAP STV+L A   D  +     A++    R  R +  ++A V H  +    +SK      V  L L  G+  +S     SP   G   L  L  R           +PP+W LA+ V+ A+R    P+ AAR  +   +  P   V      ++I  +EL   W  V ++   ++PA + S+  E  L+  + + +  G  L+    + +FLDV   +  L+PIL+HK + +             E  W L   + L   GIL   FA  +W    G +  ++       F VL+KLG+ LP+       G    L+ + R+T T+   V    + LV+MRL +      R  FD          V  +WEF     P+GL+ERL+ASCH +G V   +CWR GA F +H+  +    G      +   S TS   +      K FG  +   VW A+R+V S   +   ++PG+ W   + C KH  + L+  + V+   G    DP++   A    RC
Sbjct:   48 VKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQD-----TKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDK--FAETAE--RIQRRVRELVA-VWHEARGLRGRSKGH----VTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIH----VPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMISNW-ESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQP-----------FENRW-LWMRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPM-------GRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVG----DPLLPAAAPDARRC 661          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.100e-39
Identity = 186/638 (29.15%), Postives = 274/638 (42.95%), Query Frame = 0
Query:   20 KVVFIGHSGAGKTSLIKSIKAGEGRLALEEELES-VGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLDKNKELEN-------------RLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENG-------------------LAD------LQDRL--KKYGEGM---QWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSW-----IPLEELRLHWA----CVNNSPVINLPAKLRSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRRNGG----GACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAG-GSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRIL 599
            KVV +G  GAGKTSL +S+KA E     E + ES V   V+  + E      + VR+YD AG+V + GL QMFLT RA+ VLV +A +F  + +   N             R+ +WL ++ +R P++ V+L AT  D           LA     +    I A +EH+ +       S     ++ ++LE  + L S   T  GE+G                   +AD      L  RL  K  G G+   Q ++P SW +A+ VL+A+  G +PVE   R     D      T +        I +E+L + W      +  S V    AK         L+  + +RE  GSL+++ + +FLDV   A  L P+LNHK Q    G    G    A   L+ P  +++  +L S+G+LE R A  +W N    L       L  LG+  PL      P                   K  +VL+RL  + P       D F  L     +   W+  LG  P G +E+++  C  +G V   + WR G         V +   G FA+ L++  SST N      L  + FG+    A W  L +V+S       DFPGL W+  + CP+H   +L
Sbjct:  195 KVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCD-----------LAGGNAGK----IGARMEHACRRW---LSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAK-------NALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPN---GLSEYVLPALAFLGLTFPL---EDDP------------------AKGLVVLLRLKPDRPESVGHAIDTFC-LDHTPALSASWKIFLG-VPPGAIEKVLTRCCGLGGV--RTFWRYGVLVHGGLGEVHVGRRGIFAVVLEY--SSTDN-----ELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTML 767          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 2.030e-36
Identity = 179/668 (26.80%), Postives = 274/668 (41.02%), Query Frame = 0
Query:   13 PVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEELESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRF--------------LDKNKELENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLADLQDRLKKYGEGMQW---------------------------------LIPPSWRLAIVVLDAVRDGVEPVEAARRHM-------NHEDLHPVESTRKRS--WIPLEELRLHWACVNNSPVINLPAKLRSDD-----PEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRR--NGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLRADWGVV--TEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVKDSKGRFPGD 615
            PV   + KVV +G  GAGKTSL +S++ G        E  +V + V+     NG      +R+YD AG+V + GL QMFL+ RA+ +LV D   F               D +K  E R+ +WL +L  R P S V++ AT  D       LA  +      R   AI            E  +S     + ++ +E G+ L S  P    E+G A L  R K   E   W                                 ++P SW +A+ VLDA+  G  PVE+A++++          ++ P    R +    +   +L   W    N  V    A L  D      P+  L+  + +RE  GSL++H   VFLDV   A  L P+LNH+       G  +    G  L++   +++  +L   G+LE   A  LW +    L +     L  LG+  PL      P +                    +VL+RL +  P +     D F   R D   V   +W+  LG  P G +E+++  C  +G +   + WR G   V  +    +A  +FAL ++++            + +K +G+    A W AL F IS   +   +FPGL W+A + CP+HE  +    A  +      PGD
Sbjct:  279 PVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDV-NGV----TLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCD-------LAAGMGTDAAGRIEGAI-----------GEWLESWSGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKR-KSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKW----NEVV----AALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPD---GLSNYVLPALDSLGLTYPL---DDDPAEG------------------LVVLLRLDEKRPEDVGKELDDF---RRDHTAVLSVKWKVFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGIAARTFALVVEYSHDKCE-------VDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQISKAATR------PGD 870          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 3.470e-36
Identity = 176/621 (28.34%), Postives = 259/621 (41.71%), Query Frame = 0
Query:   20 KVVFIGHSGAGKTSLIKSIKAGEGRLALEEELES-VGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRF--------------LDKNKELENRLKEWLVTLQQRAPHSTVLLCATHKD----------KCVPSTLLAKSLAWFRRSRSIEAILADV-EHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLAD-----LQDRL--KKYGEGM---QWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSW-----IPLEELRLHWACVNNSPVINLPAK-LRSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRRNGG----GACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKH 594
            K++ +G  GAGKTSL KS+KA E     E + ES V   V+  + E      + +R+YD AG+V + GL QMFLT RA+ V+V +A  F               D  K  E R+ +WL ++ +R P + V+L AT  D          K +         +W R       +   V   S    N     ERST  ++++            TC   +G  D     L  RL  K  G G+   Q +IP SW +A+ VL+A+  G +PVE     +   D      T          I  E+LR  W        + L  + +   + +  L+  + +RE  GSL++H   VFLDV   A  L P+LNHK +    G    G        LE P  +++  +L ++G+LE R A  LW N    L       +  LG  L  PL++   G                     +VL+RL  + P       D F  L     +   W+  LG  P G +E+++  C  +G V   + WR G   V          G FA+ L+++ S          L  + FG+    A W AL +V+S       DFPGL  +  + CP+H
Sbjct:  338 KIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEG-----SSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAME---------GGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKW----QEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPN---GLSEYVIPTIASLG--LTFPLENDPAGG-------------------LVVLLRLEHDRPELVGKVIDTFC-LDQTPALRASWKIFLG-VPAGAIEKVLTRCCSLGGV--QTFWRSGV-LVHGGVGEQDRSGIFAVVLEYSPSDNE-------LTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.040e-34
Identity = 169/647 (26.12%), Postives = 269/647 (41.58%), Query Frame = 0
Query:   13 PVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEELESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRF--------------LDKNKELENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLADLQDR------------------------------LKKYGE--GMQWLIPPSWRLAIVVLDAVRDGVEPVEAARRHM-------NHEDLHPVESTRKRS--WIPLEELRLHWACVNNSPVINLPAKLRSD-----DPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRR--NGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLRADWGVV--TEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHE 595
            PV   + KV+ +G  GAGKTSL +S++ G        E  +V + V+     NG      +R+YD AG+V + GL QMFL+ RA+ +LV D   F               D NK  E R+ +WL +L  R P S V++ AT  D       LA  +A    +R        +E           S     + ++++E G+ L S   +   E+G A L  R                                  GE  G   ++P SW + + VLDA+  G +PVE+A++ +          ++ P    R +    +   +L   W  V         A L  D     +P+  L+  + +RE  GSL++H   VFLDV   A  L P+LNH+       G  +    G  L++   +++  +L   G+LE   A  LW +    L +     L  LG+  PL      P +                    +VL+RL +  P +     D F   R D   V   +W+  LG  P G +E+++  C  +G +   + WR G   V  +    +A  +FAL ++++  +         + ++ +G+    A W AL + IS   +   +FPGL W+A + CP+HE
Sbjct:  243 PVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDV-NGV----TLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCD-------LAAGMAADAAARMAGGAGNWIE-----------SWSDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDV--------VAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPD---GLSNYVLPTLDSLGLTYPL---DDDPAEG------------------LVVLLRLDEKRPEDVGKELDDF---RRDHTAVLSVKWKIFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGMAAKTFALLIEYSHDTCE-------VDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHE 820          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 2.280e-34
Identity = 174/620 (28.06%), Postives = 262/620 (42.26%), Query Frame = 0
Query:    6 GELGKTQPVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEELES-VGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLDKNK-ELEN-RLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLADLQDRLKKYGEGMQWL--------------------------IPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSWIPLEELRLHWACVNNSPVINLPAKLRSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKLRA-DWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHE 595
            G    T+P+     KVV IG    GKTSL +SI  G   +     +ES V V V++HK +        +R++D AG+V +YGL Q+FLT RA+Y+LVWDA++  + +   LE+  +  WL  L  R P++ V+L     D+ V +             R +++ +       K H  Q           L LE G+ L+S + +C G +  A        +G G  W                           +PPS+RLA+ +L+      E   ++RR          + TR  +   LEE + H A V        P       PE  +   + +R+  G L+++   VFLDVE FA  L P+ +H   RR+  G     G R+     L++  +L ++ + E + AE LW  +    PH     L   G+  PLP   + P                      ++L+R+    P E   R +  N+ R  D  +     FSLG  P G VERL+A C H+G       WR GA  V + A   L    F+LSL +++           L V+  G  E    W AL  V+S       +FPGL  +    CP+H+
Sbjct:  441 GTTAVTRPL-----KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWME------KAHGHQPHG--------LSLEDGVSLVSCAQSCLGVSAPA--------FGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE------ELASSSRRKAE-------QRTRGITRADLEE-KWH-AKVAELNGAGTPVAA----PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSH---RRDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWTPELA--PHLLL-ALKSAGLTFPLP---NDPNGG------------------LVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPP-GFVERLLARCCHLG--YPYPFWRYGALIVGNGAEKGL----FSLSLDYSEHDNM-------LKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHK 965          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.000e-33
Identity = 182/666 (27.33%), Postives = 284/666 (42.64%), Query Frame = 0
Query:    1 MKRYYGEL--GKTQPVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEELES-VGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLDKNK-ELEN-RLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQLISSSPTCYGENGLADLQDRLKKYGEGMQWL--------------------------IPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSWIPLEELRLHWACVNNSPVINLPAKLRSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARFDAFNKL-RADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVKDSKGRFPGDPIIRPGAIHHCR-CQEEVA 633
            ++ YY  +  G T  V   L KVV IG    GKTSL +SI  G   +     +ES V V V++HK +        +R++D AG+V +YGL Q+FLT RA+Y+LVWDA++  + +   LE+  +  WL  L  R P + V+L     D+ V +             R +++ +       K H  Q           L LE G+ L+S + +  G +  A        +G G  W                           +PPS+RLA+ +L+      E   ++RR          + TR  +   LEE + H A V        P       PE  +   + +R+  G L+++   VFLDVE FA  L P+ +H   RR+  G     G R+     L++  +L ++ + E + AE LW  +    PH     L   G+  PLP   + P                      ++L+R+    P E   + +  +K   AD  +     FSLG  P G VERL+A C H+G       WR GA  V + A   L    F+LS+++++           L ++ FG  E    W AL  V+S       +FPGL  +    CP+H+ + +     ++ + GR PG  ++     + C+ CQ+  A
Sbjct:  523 VRGYYDAMFKGGTTAVTRPL-KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWME------KAHGHQPHG--------LSLEDGVSLVSCAQSGLGVSAPA--------FGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE------ELASSSRRKAE-------QRTRGITRADLEE-KWH-AKVAELNGAGTPVAA----PEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSH---RRDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWTPELA--PHLLL-ALKSAGLTFPLP---NDPNGG------------------LVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPP-GFVERLLARCCHMGYPFP--FWRYGALIVGNGAEKGL----FSLSVEYSEEDK-------ILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMP----IRTTDGR-PGSCLVEES--YFCQLCQDREA 1090          
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.230e-31
Identity = 178/658 (27.05%), Postives = 279/658 (42.40%), Query Frame = 0
Query:    8 LGKTQPVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEELES-VGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVLVWDASRFLD-KNKELEN-RLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLLAKSLAWFRRSRSIEAILADVEHSIKEHNEQ-SKSERSTSVESLKLEYGIQLISSSPTCYG--------------ENGLADLQDRLKKYGEG----MQWLIPPSWRLAIVVLDAVRDGVEPVEAARRHMNHEDLHPVESTRKRSWIPLEELRLHWACVNNSPVINLPAKLRSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQRRNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPHQTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRLPQNAPCETRARF---DAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHIGNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLVVKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILHFLAGVK-DSKGRFPGDPIIRPGAIHHCRCQEEVASRLGTV 639
            +G T  V   L KVV +G    GKTSL +SIK G+  +      ES V V V++H  +        +R++D AG+V +YGL Q+FLT RA+Y+LVWDA++  + +   LE+  +  WL  L  R P ++V+L     D+ V +          RR+    A+  DVEH  ++  E   +  R      + LE G+ L+S + +  G              +     L  R+          +   +P S+RLA+ +L       E + +  R          + TR  +   LEE         N    ++ A      P+  +   + +R+  G L+++   VFLDVE FA  L P+  HK   R+  G     G R+     + + ++L  + +LE + AE LWG      PH     L   G+  PL   S+                        ++L+R+    P +   +    D  NK   D  +V E  F LG  P G VERL+A C H+G  +    WR GA  V   A   +    F+LSL+++++          L V+  G       W AL  V+S       +FPGL  +    CP      LH   G+K  +K   PG  ++  G    C+  ++ ++ +G V
Sbjct:  367 MGGTTAVTRPL-KVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGH-----PIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRT----------RRT----AVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEML-------EELASCSRSKTE------QQTRGITRAILEEKWQAKVAEMNRAGTSVAA------PDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHK---RDSYGKIDLGGIRV---MDVDSLDRLDEEHVLEPQLAEDLWGPVLA--PHLLL-ALKSAGLTFPLSNDSNGG---------------------LVILLRMDTKPPPDYGIKLKEKDQANKF--DLRLVVECSFRLGLPP-GFVERLLARCCHLG--LPYPFWRYGALIVGKGAEERM----FSLSLEYSEARK-------ILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCP------LHKTNGMKIRTKDARPGSCLV--GESDFCKLCQDRSAAVGLV 931          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16793.4237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW02_9PHAE6.160e-6531.04Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI9.240e-6029.40LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K8T1_9PHAE1.920e-5429.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ8_9PHAE2.100e-3929.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL98_ECTSI2.030e-3626.80LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI3.470e-3628.34LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL89_ECTSI1.040e-3426.12LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI2.280e-3428.06LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI1.000e-3327.33LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI4.230e-3127.05LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 20..143
e-value: 9.5E-18
score: 64.6
NoneNo IPR availableGENE3D3.40.50.300coord: 95..199
e-value: 2.2E-10
score: 42.7
NoneNo IPR availableGENE3D3.30.70.1390coord: 19..94
e-value: 4.1E-12
score: 48.1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 764..778
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 743..763
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..742
NoneNo IPR availableTMHMMTMhelixcoord: 741..763
IPR020859Roc domainPROSITEPS51424ROCcoord: 12..227
score: 25.157
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16793contigH-elongata_contig16793:965..7307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16793.4237.1mRNA_H-elongata_contig16793.4237.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16793 842..7554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16793.4237.1 ID=prot_H-elongata_contig16793.4237.1|Name=mRNA_H-elongata_contig16793.4237.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=779bp
MKRYYGELGKTQPVLIDLRKVVFIGHSGAGKTSLIKSIKAGEGRLALEEE
LESVGVSVQNHKFENGCEGETDVRLYDLAGKVEHYGLHQMFLTERALYVL
VWDASRFLDKNKELENRLKEWLVTLQQRAPHSTVLLCATHKDKCVPSTLL
AKSLAWFRRSRSIEAILADVEHSIKEHNEQSKSERSTSVESLKLEYGIQL
ISSSPTCYGENGLADLQDRLKKYGEGMQWLIPPSWRLAIVVLDAVRDGVE
PVEAARRHMNHEDLHPVESTRKRSWIPLEELRLHWACVNNSPVINLPAKL
RSDDPEFTLQSVMDMRERGGSLLKHPEVVFLDVEDFALSLAPILNHKTQR
RNGGGACIFAGRRLEQPWQLSAEEKLVSKGILETRFAEFLWGNDFGALPH
QTFDVLVKLGILLPLPLQSHTPGDHRFLSRAWRNTTSWRHVKEFLVLMRL
PQNAPCETRARFDAFNKLRADWGVVTEWEFSLGRTPHGLVERLVASCHHI
GNVVKNSCWRRGACFVAHNAAVDLAGGSFALSLQFTQSSTSNLRTGGTLV
VKAFGNREGRAVWGALRFVISTAWSSFHDFPGLSWQARVMCPKHEGRILH
FLAGVKDSKGRFPGDPIIRPGAIHHCRCQEEVASRLGTVLPPSSPLENVF
EPESEGEQGHVSFDEDGEERFTAALDNAMNATTEKAPIVDETTKSGSWRT
PEWVKEALVAGPSGAIVLCNSWAPIFKMAYHWRDGVYAEAVPLTLFAVVM
AMIVVVCAVVAGIRKLRQKYRWWSTKHD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020859ROC_dom
IPR027417P-loop_NTPase