prot_H-elongata_contig167511.4211.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167511.4211.1
Unique Nameprot_H-elongata_contig167511.4211.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
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BLAST of mRNA_H-elongata_contig167511.4211.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.210e-22
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 TLAGVELLYASLFCNGDVDVARTALTFKVSSSLRGNRRFEFGFRLGVATVLL 52
            TLAG ELLYASLFCNGDVDVARTALTFK SSSLRGNRRF+FG+RLG ATVLL
Sbjct:  436 TLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLL 487
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BLAST of mRNA_H-elongata_contig167511.4211.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.210e-22
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 TLAGVELLYASLFCNGDVDVARTALTFKVSSSLRGNRRFEFGFRLGVATVLL 52
            TLAG ELLYASLFCNGDVDVARTALTFK SSSLRGNRRF+FG+RLG ATVLL
Sbjct:  341 TLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLL 392
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167511.4211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHJ2_ECTSI3.210e-2290.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJQ4_9PHAE3.210e-2290.38EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167511contigH-elongata_contig167511:93..248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167511.4211.1mRNA_H-elongata_contig167511.4211.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167511 93..248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167511.4211.1 ID=prot_H-elongata_contig167511.4211.1|Name=mRNA_H-elongata_contig167511.4211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
TLAGVELLYASLFCNGDVDVARTALTFKVSSSLRGNRRFEFGFRLGVATV
LL
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