prot_H-elongata_contig167055.4194.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167055.4194.1
Unique Nameprot_H-elongata_contig167055.4194.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: D7G354_ECTSI (COP9 signalosome complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G354_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.350e-15
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQAQVR 43
            MQEVT+WALQMRYRTTAARILDA+RKFLDASVRFYELS AQ +
Sbjct:  175 MQEVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSLAQSK 217          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A835ZDX9_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.390e-11
Identity = 29/41 (70.73%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQAQ 41
            M EV  W LQ+RYRT +AR+LDANRKFLDA++R+YELSQA+
Sbjct:  163 MAEVQNWQLQLRYRTVSARVLDANRKFLDAAMRYYELSQAR 203          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: F0Y2X5_AURAN (COP9 signalosome complex subunit 4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2X5_AURAN)

HSP 1 Score: 58.5 bits (140), Expect = 1.110e-8
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    7 WALQMRYRTTAARILDANRKFLDASVRFYELSQAQ 41
            WALQ+RYR T AR LDA RKFLDAS+R+YELSQA+
Sbjct:  158 WALQLRYRVTLARTLDARRKFLDASMRYYELSQAR 192          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A4D9CTT1_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTT1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.950e-8
Identity = 26/49 (53.06%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQAQVRRGGTSS 49
            M+ VT++ +Q+RYR T A++LDANRKFL+A++R++ELSQ Q R    +S
Sbjct:  201 MEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQTQRREDERTS 249          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: W7TQ54_9STRA (Cop9 signalosome complex subunit 4 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ54_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.310e-8
Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQAQVR 43
            M+ VT++ +Q+RYR T A++LDANRKFL+A++R++ELSQ Q R
Sbjct:  201 MEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQTQRR 243          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A6V1T605_HETAK (COP9 signalosome complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T605_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 7.370e-8
Identity = 24/34 (70.59%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    6 EWALQMRYRTTAARILDANRKFLDASVRFYELSQ 39
            +W+LQ+RYR T AR+LDANRKFL+A+VR++ELSQ
Sbjct:  175 DWSLQLRYRVTYARVLDANRKFLEAAVRYHELSQ 208          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A7S0SZ10_9STRA (COP9 signalosome complex subunit 4 (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ10_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.140e-7
Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELS 38
            M ++T+  LQ+RYR T+AR+LDANRKFL+AS+R+Y+LS
Sbjct:   65 MNDITDRHLQLRYRVTSARVLDANRKFLEASLRYYDLS 102          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A8J2SNR5_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNR5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.580e-7
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    7 WALQMRYRTTAARILDANRKFLDASVRFYELSQA 40
            WAL +RYR T AR LDA RKFLDAS+R+YELS+A
Sbjct:  176 WALHLRYRVTLARTLDARRKFLDASMRYYELSRA 209          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A7S1U060_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U060_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.790e-7
Identity = 23/39 (58.97%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQ 39
            M +V++ +L++RYRTT AR+LDANRKFLDA+ R+Y++S+
Sbjct:  127 MADVSDRSLELRYRTTYARVLDANRKFLDAATRYYDVSK 165          
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Match: A0A7S2UE05_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE05_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 5.320e-5
Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    8 ALQMRYRTTAARILDANRKFLDASVRFYELSQAQV 42
            AL +RY++T AR+LDANRKFL A+ R+++LSQAQ 
Sbjct:  173 ALILRYKSTYARVLDANRKFLQAASRYHDLSQAQT 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167055.4194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G354_ECTSI2.350e-1588.37COP9 signalosome complex subunit 4 n=1 Tax=Ectocar... [more]
A0A835ZDX9_9STRA7.390e-1170.73COP9 signalosome complex subunit 4 n=1 Tax=Tribone... [more]
F0Y2X5_AURAN1.110e-877.14COP9 signalosome complex subunit 4 (Fragment) n=1 ... [more]
A0A4D9CTT1_9STRA3.950e-853.06COP9 signalosome complex subunit 4 n=1 Tax=Nannoch... [more]
W7TQ54_9STRA4.310e-858.14Cop9 signalosome complex subunit 4 (Fragment) n=1 ... [more]
A0A6V1T605_HETAK7.370e-870.59COP9 signalosome complex subunit 4 n=1 Tax=Heteros... [more]
A0A7S0SZ10_9STRA1.140e-763.16COP9 signalosome complex subunit 4 (Fragment) n=2 ... [more]
A0A8J2SNR5_9STRA2.580e-773.53COP9 signalosome complex subunit 4 n=1 Tax=Pelagom... [more]
A0A7S1U060_9STRA4.790e-758.97COP9 signalosome complex subunit 4 n=1 Tax=Phaeomo... [more]
A0A7S2UE05_9STRA5.320e-562.86COP9 signalosome complex subunit 4 n=1 Tax=Attheya... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167055contigH-elongata_contig167055:1016..1171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167055.4194.1mRNA_H-elongata_contig167055.4194.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167055 1016..1186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167055.4194.1 ID=prot_H-elongata_contig167055.4194.1|Name=mRNA_H-elongata_contig167055.4194.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MQEVTEWALQMRYRTTAARILDANRKFLDASVRFYELSQAQVRRGGTSSF
F*
back to top