prot_H-elongata_contig166312.4166.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig166312.4166.1
Unique Name	prot_H-elongata_contig166312.4166.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	91

Homology

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: D7FJM8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM8_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.340e-39
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGFQEEV  LV SCP GRQTLLFSATMNTKVD LA+LALNKPVRVKASP+NSAPQRL QEFVRIRQSREQDREAILLSLL R
Sbjct:  461 DEADRLLELGFQEEVAELVKSCPIGRQTLLFSATMNTKVDDLASLALNKPVRVKASPMNSAPQRLVQEFVRIRQSREQDREAILLSLLTR 550

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A835YJC4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.970e-31
Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLE+GF+EEV  LV  CP GRQT+LFSATMNTKV  L  LALNKPVRV A+P NS   RL QEFVR+RQSRE DREAILLSLL+R
Sbjct:  439 DEADRLLEMGFEEEVHTLVEHCPRGRQTMLFSATMNTKVQGLIKLALNKPVRVVATPPNSVNTRLVQEFVRVRQSREMDREAILLSLLSR 528

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A1W0A5F9_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5F9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.210e-26
Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGF EEV+ LVG CP  RQT+LFSATM +KVD L  L++ +PVR+   PL    Q L QEFVRIR++RE+DREAILL+L  R
Sbjct:  368 DEADRLLELGFTEEVQELVGMCPIARQTMLFSATMTSKVDELIKLSMKRPVRISTDPLFDMAQNLVQEFVRIRRTREEDREAILLALCTR 457

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A7S2WP83_9STRA (Hypothetical protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WP83_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.770e-26
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGF +EV  LV  CP  RQTLLFSATM T V+ LA L+LN+PVRV+A PL     RL QEFVRIR SRE+DREA+LL+L  R
Sbjct:  376 DEADRLLELGFMDEVMELVKFCPKSRQTLLFSATMTTSVNQLAELSLNRPVRVQADPLYDMAARLVQEFVRIRPSRERDREAMLLALCTR 465

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A7S1C375_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C375_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.750e-26
Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGF EEV+ +V +CP GRQTL+FSATM   VD LA ++L +PVRV A PL    QRL QEF+R+R  RE DREAI++SL+ R
Sbjct:  221 DEADRLLELGFTEEVEEVVKACPKGRQTLMFSATMTDDVDKLAKMSLKRPVRVSADPLYDLSQRLVQEFIRVRDDREDDREAIMVSLVTR 310

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A1V9ZGW0_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGW0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.070e-25
Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGF EEV+ LVG CP  RQT+LFSAT+ +KVD L  L++ +PVR+   PL    Q L QEFVRIR +RE+DREAILL+L  R
Sbjct:  388 DEADRLLELGFTEEVQELVGMCPVARQTMLFSATLTSKVDELIKLSMKRPVRISTDPLYDMAQNLVQEFVRIRPTREEDREAILLALCTR 477

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A067C0U9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0U9_SAPPC)

HSP 1 Score: 108 bits (270), Expect = 1.460e-25
Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGF EEV+ LVG CP  RQT+LFSAT+ +KVD L  L++ +PVR+   PL    Q L QEFVRIR +RE+DREAILL+L  R
Sbjct:  380 DEADRLLELGFTEEVQELVGMCPLARQTMLFSATLTSKVDELIKLSMKRPVRISTDPLYDMAQNLVQEFVRIRPTREEDREAILLALCTR 469

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A6A5AY44_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AY44_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.050e-25
Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGFQEEV+ LV  CP  RQTLLFSAT+ +KVD L  L++ +PVR+   PL    Q L QEFVRIR +RE DREAILL+L  R
Sbjct:   17 DEADRLLELGFQEEVQELVKFCPVARQTLLFSATLTSKVDELIKLSMKRPVRISTDPLFDMAQHLVQEFVRIRPTREDDREAILLALCTR 106

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A418DL23_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DL23_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.170e-25
Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGFQEEV+ LV  CP  RQTLLFSAT+ +KVD L  L++ +PVR+   PL    Q L QEFVRIR +RE DREAILL+L  R
Sbjct:  386 DEADRLLELGFQEEVQELVKFCPVARQTLLFSATLTSKVDELIKLSMKRPVRISTDPLFDMAQHLVQEFVRIRPTREDDREAILLALCTR 475

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BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Match: A0A397EHJ6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EHJ6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.570e-25
Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKPVRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR 90
            ++ADRLLELGFQEEV+ LV  CP  RQTLLFSAT+ +KVD L  L++ +PVR+   PL    Q L QEFVRIR +RE DREAILL+L  R
Sbjct:  325 DEADRLLELGFQEEVQELVKFCPVARQTLLFSATLTSKVDELIKLSMKRPVRISTDPLFDMAQHLVQEFVRIRPTREDDREAILLALCTR 414

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot

BLAST of mRNA_H-elongata_contig166312.4166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJM8_ECTSI	1.340e-39	87.78	DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re...	[more]
A0A835YJC4_9STRA	7.970e-31	73.33	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A1W0A5F9_9STRA	4.210e-26	62.22	DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca c...	[more]
A0A7S2WP83_9STRA	5.770e-26	65.56	Hypothetical protein (Fragment) n=2 Tax=labyrinthu...	[more]
A0A7S1C375_9STRA	7.750e-26	61.11	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A1V9ZGW0_9STRA	1.070e-25	61.11	DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna...	[more]
A0A067C0U9_SAPPC	1.460e-25	61.11	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A6A5AY44_9STRA	2.050e-25	62.22	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A418DL23_9STRA	2.170e-25	62.22	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A397EHJ6_9STRA	3.570e-25	62.22	Uncharacterized protein (Fragment) n=2 Tax=Aphanom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..61 e-value: 2.0E-13 score: 52.3
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 2..89
None	No IPR available	PANTHER	PTHR24031:SF637	ATP-DEPENDENT RNA HELICASE DDX27-RELATED	coord: 2..89
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 1..53 score: 9.987
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig166312	contig	H-elongata_contig166312:467..989 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig166312.4166.1	mRNA_H-elongata_contig166312.4166.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig166312 467..989 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig166312.4166.1 ID=prot_H-elongata_contig166312.4166.1|Name=mRNA_H-elongata_contig166312.4166.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
EQADRLLELGFQEEVKGLVGSCPAGRQTLLFSATMNTKVDHLAALALNKP
VRVKASPLNSAPQRLAQEFVRIRQSREQDREAILLSLLAR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase