prot_H-elongata_contig165225.4106.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig165225.4106.1
Unique Nameprot_H-elongata_contig165225.4106.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: D8LS59_ECTSI (Dynein intermediate chain family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS59_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 6.080e-44
Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGE 88
            +TVTALCFH +NGD+LA GYGAFFFSPS  + GAVLFWSVRNP YPERTIHTHS VTSLDF+ERHP LLAVG+Y+GTIAIYDTAREGE
Sbjct:  628 RTVTALCFHHYNGDVLAVGYGAFFFSPSVHKGGAVLFWSVRNPEYPERTIHTHSSVTSLDFAERHPTLLAVGMYDGTIAIYDTAREGE 715          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A7S1TVL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVL9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.210e-22
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGEV 89
            ++V+ + + + N D+LA GYG F+F    Q  GAVLFWS+RNP +PER I    GVT++DFS R+P+ +A+GLYNG I +YDT  + EV
Sbjct:  178 RSVSCMAYSKGNPDVLAVGYGEFYFDD--QNGGAVLFWSLRNPEFPERIIEVDVGVTAIDFSSRNPSYVAIGLYNGAIQVYDTRSKAEV 264          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A7S1XLS0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLS0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.270e-22
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGEV 89
            ++V+ + + + N D+LA GYG F+F    Q  GAVLFWS+RNP +PER I    GVT++DFS R+P+ +A+GLYNG I +YDT  + EV
Sbjct:  563 RSVSCMAYSKGNPDVLAVGYGEFYFDD--QNGGAVLFWSLRNPEFPERIIEVDVGVTAIDFSSRNPSYVAIGLYNGAIQVYDTRSKAEV 649          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A7S1GBN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBN6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.660e-22
Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAR 85
            + V+ + +++ N D+LA  YG F F+   QR G +LFWS++NP YPE  + T +GVT+LDFSE HPNLLA GLYNG++AIYD  +
Sbjct:   44 RNVSCMVWNKVNQDLLAVSYGQFEFTD--QRDGLILFWSMKNPEYPECVLRTPAGVTTLDFSEAHPNLLAAGLYNGSVAIYDVRK 126          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A6P8IQF8_ACTTE (WD repeat-containing protein 78-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IQF8_ACTTE)

HSP 1 Score: 98.2 bits (243), Expect = 5.990e-22
Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    3 VTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYD 82
            V+ + +++ N DILA GYG F +S   Q+ G    WS++NP YPER  H +SGVT+LDFS  HPNLLAVGLY+GTIAIY+
Sbjct:  475 VSCMAWNKKNLDILAVGYGEFSYS--GQKGGLACCWSIKNPEYPERVFHVNSGVTALDFSAAHPNLLAVGLYDGTIAIYN 552          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A3M6TFN4_POCDA (Uncharacterized protein n=4 Tax=Scleractinia TaxID=6125 RepID=A0A3M6TFN4_POCDA)

HSP 1 Score: 97.1 bits (240), Expect = 1.520e-21
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYD 82
            + V+ L +++ N DILA GYG F FS   Q+ G    WS++NP YPER  H  SGVT++DFS  HPNLLAVG+Y+GTIAIY+
Sbjct:  459 RNVSCLAWNKLNPDILAVGYGEFVFSE--QKGGLACCWSIKNPEYPERIFHLDSGVTAVDFSAAHPNLLAVGMYDGTIAIYN 538          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: UPI00077AD9F3 (WD repeat-containing protein 78-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD9F3)

HSP 1 Score: 96.3 bits (238), Expect = 2.750e-21
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGEV 89
            + V+ + +++ N DILA GYG F FS   Q+ G    WS++NP YPER  H  SGVT+LDFS  HPNLLAVG+Y+GTIAIY+     ++
Sbjct:  458 RNVSCMAWNKLNPDILAVGYGEFVFSE--QKGGLACCWSLKNPEYPERYFHLISGVTALDFSAAHPNLLAVGMYDGTIAIYNVRNRNDM 544          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: UPI001CF3BC3E (dynein axonemal intermediate chain 4-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3BC3E)

HSP 1 Score: 96.3 bits (238), Expect = 2.840e-21
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGEV 89
            + V+ + +++ N DILA GYG F FS   Q+ G    WS++NP YPER  H  SGVT+LDFS  HPNLLAVG+Y+GTIAIY+     ++
Sbjct:  458 RNVSCMAWNKLNPDILAVGYGEFVFSE--QKGGLACCWSLKNPEYPERYFHLISGVTALDFSAAHPNLLAVGMYDGTIAIYNVRNRNDM 544          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A7S2BXA5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXA5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.360e-21
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTARE 86
            +TVT++ +++ N DILA GYG F  S +A   G VLFWS+RNP +PER +   SGVT++DFS + PNLLAVG+Y+GT+AIY+  ++
Sbjct:  155 RTVTSMVWNRVNKDILAVGYGEFQSSENA--GGLVLFWSLRNPQFPERVLDIPSGVTAVDFSSKMPNLLAVGMYDGTVAIYNLRKD 238          
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Match: A0A7S2RSJ4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RSJ4_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.250e-21
Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    1 QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTIHTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGE 88
            +TV+ + +++ N D+LA  Y  F FS   QR G +LFW+++NP YPER I   SGV S+DFS  HP+LLA G+Y+GT+AIYD   EG+
Sbjct:  559 RTVSGMSWNKANQDLLAVSYCQFQFSD--QRDGLILFWTLKNPEYPERIIKCESGVCSVDFSTVHPSLLAAGMYDGTVAIYDVHHEGD 644          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165225.4106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS59_ECTSI6.080e-4482.95Dynein intermediate chain family n=1 Tax=Ectocarpu... [more]
A0A7S1TVL9_9STRA1.210e-2250.56Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XLS0_9STRA1.270e-2250.56Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1GBN6_9STRA4.660e-2252.94Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6P8IQF8_ACTTE5.990e-2257.50WD repeat-containing protein 78-like isoform X1 n=... [more]
A0A3M6TFN4_POCDA1.520e-2156.10Uncharacterized protein n=4 Tax=Scleractinia TaxID... [more]
UPI00077AD9F32.750e-2151.69WD repeat-containing protein 78-like n=1 Tax=Acrop... [more]
UPI001CF3BC3E2.840e-2151.69dynein axonemal intermediate chain 4-like n=1 Tax=... [more]
A0A7S2BXA5_9STRA3.360e-2153.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RSJ4_9STRA7.250e-2151.14Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 43..82
e-value: 7.0E-4
score: 28.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..89
e-value: 5.7E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR12442DYNEIN INTERMEDIATE CHAINcoord: 2..83
NoneNo IPR availablePANTHERPTHR12442:SF12WD REPEAT-CONTAINING PROTEIN 78coord: 2..83
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig165225contigH-elongata_contig165225:24..543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig165225.4106.1mRNA_H-elongata_contig165225.4106.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig165225 24..543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig165225.4106.1 ID=prot_H-elongata_contig165225.4106.1|Name=mRNA_H-elongata_contig165225.4106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
QTVTALCFHQHNGDILAAGYGAFFFSPSAQRSGAVLFWSVRNPAYPERTI
HTHSGVTSLDFSERHPNLLAVGLYNGTIAIYDTAREGEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf