prot_H-elongata_contig163811.4035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig163811.4035.1
Unique Name	prot_H-elongata_contig163811.4035.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	145

Homology

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: D7FM44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM44_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 5.600e-73
Identity = 121/137 (88.32%), Postives = 132/137 (96.35%), Query Frame = 0

Query:    8 QADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPKPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            QADPGRSIP GTL+AIATVT TY+VFV +FGTI+SNE+LI +KLVA+RVAWPTHYLVSVGIVFSSLGAAMQCLVG+SRLVAAIANDHTIPLL PF+PKPDEEP+KAVYLVW+LASLPCLAGNLDYITPVMTMFFLLM
Sbjct:   98 QADPGRSIPKGTLAAIATVTATYVVFVLMFGTILSNEVLIAEKLVASRVAWPTHYLVSVGIVFSSLGAAMQCLVGSSRLVAAIANDHTIPLLRPFAPKPDEEPNKAVYLVWVLASLPCLAGNLDYITPVMTMFFLLM 234

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A6H5L1Z6_9PHAE (Ccc protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z6_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 4.010e-71
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPKPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R    ADPGRSIP GTL+AIATVT TY+VFV +FGTI+SN++L+ +KLVA+RVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLL PF+PKPDEEP+KAV+LVW+LASLPCLAGNLDYITPVMTMFFLLM
Sbjct:  330 GCNRSAVLADPGRSIPKGTLAAIATVTATYVVFVLMFGTILSNQVLVAEKLVASRVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLRPFAPKPDEEPNKAVFLVWVLASLPCLAGNLDYITPVMTMFFLLM 473

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A7S2K263_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K263_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.210e-43
Identity = 82/145 (56.55%), Postives = 104/145 (71.72%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSP-KPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R    ++PG+SIPTGT+ AI T T  Y+  VWLFG+ +SNE L  DKL+   V +P   +V +GI+ SS+GAA+QC+ GA RL+AAIA D TIP L PF P  P  EP +AV+L W +ASLP LAGNLD+ITP++TMFFLLM
Sbjct:  365 GSNRSSVLSNPGKSIPTGTIGAIMTTTLIYISVVWLFGSFVSNEALKADKLIVTAVTFPHELIVKIGIIMSSIGAALQCVAGAPRLLAAIAMDETIPFLRPFMPASPTAEPKRAVWLTWFIASLPTLAGNLDFITPIITMFFLLM 509

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A7S4MWD7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWD7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 8.570e-39
Identity = 79/148 (53.38%), Postives = 100/148 (67.57%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPKPDEE----PSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R    ADPGRSIP GT+SAI   T  Y+  VWLFG  +SN  L  DK V + VA+P   +V VG+V S +GAA+QCL GA RL+ AIA D T+P+L    PK  E+    P KAV++ W +AS+P LAGNLD+ITP++TMF+LLM
Sbjct:  303 GSNRSAVLADPGRSIPRGTISAIGATTAVYVCVVWLFGLTVSNRTLKTDKFVVSSVAFPNDSVVKVGVVLSCVGAALQCLAGAPRLLQAIAMDGTMPMLKSLQPKHGEDITSTPKKAVWITWFIASVPTLAGNLDHITPIVTMFYLLM 450

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A2R5GRV7_9STRA (Solute carrier family 12 member 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRV7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.940e-37
Identity = 75/145 (51.72%), Postives = 101/145 (69.66%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPF-SPKPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R     +PGR+IP GTL AIAT T  Y++  WLFG +++NE L+ +KLVA+ +AWP  Y+V+VGI+ S +GA +Q L GA +L+ +IAND  IP L  F +  PD+EP +AV     +A+  CLAGNLDYITP++TMFFL M
Sbjct:  368 GSNRSGVLENPGRAIPKGTLGAIATTTSLYIMTTWLFGLVVANETLLSNKLVASTIAWPHQYVVAVGIIMSCVGAGLQSLAGAPQLLKSIANDGHIPFLRVFGTANPDDEPRRAVAFTTAIAAATCLAGNLDYITPIITMFFLSM 512

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A7R9YE43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE43_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.560e-37
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPKPDEE----PSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R     +PG SIP GTL+AI T    Y++ VW+FG  +SN+ L +DKL+ A VAWP  Y V VGIV S++GA +Q L GA RL+ AIAND  +P L  F+ +PDE       +AV L +++ASLPCLAGNLD+ITP +TM FL+M
Sbjct:  307 GSNRSGVLRNPGVSIPKGTLAAIVTTYVVYILTVWMFGLSISNDALKDDKLIVAAVAWPAKYAVQVGIVLSTVGAGLQSLTGAPRLLVAIANDGFVPFLQYFAQRPDEPLETTVKRAVILTYVIASLPCLAGNLDFITPFITMLFLIM 454

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: F0YC09_AURAN (AA_permease domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC09_AURAN)

HSP 1 Score: 142 bits (359), Expect = 5.240e-37
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPKPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R    A P +SIP GTL+AIA  T  Y+V VWL+G ++++++LIE+KLV A VAWP+  +V +GI+ S +GAA+Q L GA RL+AAIA+D  +P+L  F+P P +    A+ L W +AS+PCLAG L+ ITP++TMFFLLM
Sbjct:  378 GSNRSGVLATPSKSIPLGTLAAIALTTFLYVVVVWLYGLVVAHDVLIEEKLVVALVAWPSPIIVKLGIIMSCVGAALQSLTGAPRLLAAIASDGALPVLAAFAP-PVDAGWPALALTWFVASIPCLAGELNAITPIVTMFFLLM 520

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A835Z2U9_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U9_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.810e-36
Identity = 83/155 (53.55%), Postives = 101/155 (65.16%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPF-SPKPD----------EEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R     +PGRSIP GTL AIA     YL F+W FG  ++   LI+DKLVA  VAWPT YLV+VGIV +SLGAAMQC+ GAS L+AAIA+D  +P+L  F SP               P++AV    ++A+LPCLAGNLDYIT  +TM FLLM
Sbjct:  295 GCNRSAVLHNPGRSIPKGTLWAIAATALLYLFFMWFFGCSVAYGTLIDDKLVAMHVAWPTPYLVAVGIVAASLGAAMQCVTGASSLLAAIADDGALPVLSAFASPAAXXXXXXXXXXARAPARAVVATGLIAALPCLAGNLDYITAPITMAFLLM 449

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A7S1BPY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPY8_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.370e-35
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPK-PDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R     +   SIPTGT+SAI   T  Y +FV L  + +SN+IL+E+KLV A +A+P   +V  GI+ SSLGAA+QCL GASRL+AAIA D  +P L  F+P+ P   P KA+ + W++ASL  +AGN+D+ITP++TMFFL+M
Sbjct:  320 GSNRSAVLKNSSESIPTGTISAIFATTGLYFLFVSLLSSTLSNDILLENKLVVADIAFPHPIIVKAGIIMSSLGAALQCLTGASRLLAAIAEDGCLPFLRAFTPETPSANPVKAIIVTWLIASLFTIAGNIDFITPIITMFFLMM 464

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BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Match: A0A7S2R6E1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R6E1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.710e-35
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 0

Query:    1 GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDKLVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLWPFSPK-PDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM 144
            G  R      PG+SIP GTL AI T T  Y++ VWLFG  ++N  L+E+KLVA+ +AWP  Y+V VGI+ S +GA +Q L GA +L+ +IAND  IP L  F  + P++EP +AV     +A++ C AGNLDYITP++TMFFL M
Sbjct:  317 GSNRSGVLRSPGQSIPRGTLGAITTTTSLYIITVWLFGLSVANSTLMENKLVASYIAWPHQYVVGVGIIMSCVGAGLQSLAGAPQLLKSIANDGHIPFLKIFGTEHPEDEPRRAVVFTTSIAAVCCFAGNLDYITPIITMFFLSM 461

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot

BLAST of mRNA_H-elongata_contig163811.4035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FM44_ECTSI	5.600e-73	88.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L1Z6_9PHAE	4.010e-71	83.33	Ccc protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A7S2K263_9STRA	2.210e-43	56.55	Hypothetical protein n=2 Tax=Leptocylindrus danicu...	[more]
A0A7S4MWD7_9STRA	8.570e-39	53.38	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A2R5GRV7_9STRA	1.940e-37	51.72	Solute carrier family 12 member 2 n=1 Tax=Hondaea ...	[more]
A0A7R9YE43_9STRA	2.560e-37	52.03	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
F0YC09_AURAN	5.240e-37	52.08	AA_permease domain-containing protein (Fragment) n...	[more]
A0A835Z2U9_9STRA	7.810e-36	53.55	Amino acid permease-domain-containing protein n=1 ...	[more]
A0A7S1BPY8_9STRA	1.370e-35	51.03	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A7S2R6E1_9STRA	3.710e-35	50.34	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1740.10		coord: 8..144 e-value: 1.8E-15 score: 58.6
None	No IPR available	PANTHER	PTHR11827:SF73	KAZACHOC, ISOFORM G	coord: 4..144
None	No IPR available	PANTHER	PTHR11827	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	coord: 4..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..61
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 92..114
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 115..143
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 144..144
None	No IPR available	TMHMM	TMhelix		coord: 62..84
None	No IPR available	TMHMM	TMhelix		coord: 114..136
None	No IPR available	TMHMM	TMhelix		coord: 20..42
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 10..143 e-value: 9.6E-10 score: 37.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig163811	contig	H-elongata_contig163811:172..1045 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig163811.4035.1	mRNA_H-elongata_contig163811.4035.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig163811 172..1045 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig163811.4035.1 ID=prot_H-elongata_contig163811.4035.1|Name=mRNA_H-elongata_contig163811.4035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
GLGRCQTQADPGRSIPTGTLSAIATVTCTYLVFVWLFGTIMSNEILIEDK
LVAARVAWPTHYLVSVGIVFSSLGAAMQCLVGASRLVAAIANDHTIPLLW
PFSPKPDEEPSKAVYLVWILASLPCLAGNLDYITPVMTMFFLLM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1