prot_H-elongata_contig163645.4026.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig163645.4026.1
Unique Nameprot_H-elongata_contig163645.4026.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
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BLAST of mRNA_H-elongata_contig163645.4026.1 vs. uniprot
Match: D7G0P2_ECTSI (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-17
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0 
Query:    1 MAVESMKTGAVNGMPIVFVLDEFERFACRKPQTLLYALLDLCQ 43
            M V+SMKTGAVNG+P+VFVLDEFERFACRKPQTLLYALLDLCQ
Sbjct:  164 MMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQ 206
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BLAST of mRNA_H-elongata_contig163645.4026.1 vs. uniprot
Match: A0A6H5JJU9_9PHAE (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.170e-17
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 0 
Query:    1 MAVESMKTGAVNGMPIVFVLDEFERFACRKPQTLLYALLDLCQ 43
            M V+SMKTGAVNG+P++F+LDEFERFACRKPQTLLYALLDLCQ
Sbjct:  202 MMVDSMKTGAVNGVPVIFILDEFERFACRKPQTLLYALLDLCQ 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163645.4026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0P2_ECTSI1.140e-1790.70Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
A0A6H5JJU9_9PHAE2.170e-1786.05Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig163645contigH-elongata_contig163645:163..291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig163645.4026.1mRNA_H-elongata_contig163645.4026.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig163645 148..291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig163645.4026.1 ID=prot_H-elongata_contig163645.4026.1|Name=mRNA_H-elongata_contig163645.4026.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MAVESMKTGAVNGMPIVFVLDEFERFACRKPQTLLYALLDLCQ
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