prot_H-elongata_contig162549.3969.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162549.3969.1
Unique Nameprot_H-elongata_contig162549.3969.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: D7FVT2_ECTSI (RNase_PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT2_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.680e-53
Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 0
Query:    1 QVIVDDGAVLSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQKILREAETVR 126
            QVIVDDGAVLSAALNA+T+ALLNAGVEMTG+ALS+TCCIT       GRSV+LDP KAEE +A ATAVVATLSA GGVLSC AVG+MS+EEYFACCEAA+ GTTAVRSFVRLSAEQK+ REAETVR
Sbjct:  108 QVIVDDGAVLSAALNAATMALLNAGVEMTGMALSVTCCITATVS---GRSVLLDPCKAEEIDAAATAVVATLSAGGGVLSCHAVGSMSQEEYFACCEAASLGTTAVRSFVRLSAEQKVNREAETVR 230          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A835ZF16_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF16_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.470e-16
Identity = 56/132 (42.42%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    1 QVIVDDGAVLSAALNASTLALLNAGVEMTGIALSLTCCITGISGSG----------IGRSVI-LDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQKILRE 121
            QV+ DDG+VLSAA+NA  +AL++AGVEM G+ ++ T C +G SGS           +G S + LDPS +EE+   AT ++A L+ S G+L+ +  G +  EE FA  EAA +   AV  ++R + E K+LR+
Sbjct:  109 QVLCDDGSVLSAAINACAMALVDAGVEMIGMPVAATACFSG-SGSAAAAAPEQLQHLGESHLQLDPSASEEATTRATVMLAVLAGSDGILTMKMTGQLGAEELFAASEAARKACDAVSVYLRRAVEAKVLRD 239          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: F0W748_9STRA (Uncharacterized protein AlNc14C28G2677 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W748_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.410e-11
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   10 LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLS--ASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQKI 118
            +SA +NA T+AL++A + M G+  S TCC+T         SV+LDPS+ EE+E I+  + A+    A GGVL   + G +S+E+ F+C EA  +G+  V +F+R S  +++
Sbjct:  143 VSAVINAVTMALMDAEIAMLGVVTSTTCCLTE------DGSVLLDPSQKEEAECISLVICASSFQLAEGGVLFLSSEGPLSEEQLFSCAEACKRGSKCVETFIRQSYSKRL 247          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A3R7JMF0_9STRA (RNase_PH_C domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JMF0_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.720e-10
Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   10 LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQK 117
            L+ A+NA +LALL+AGV M  +  + +C   GI   G   ++ LDP+  EE +A++    A  S+S GVL+C   G +S+E+YFAC EA  + + +V +F R+  ++K
Sbjct:   44 LAVAINAVSLALLDAGVPMLAVVTATSC---GIFPDG---NMYLDPTSVEEEQAVSWVTTARSSSSDGVLTCITNGLLSEEQYFACSEACQRASESVAAFFRIVQQKK 145          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: Q54Q83_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54Q83_DICDI)

HSP 1 Score: 65.1 bits (157), Expect = 3.780e-10
Identity = 38/119 (31.93%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    1 QVIVDDGAVLSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQKIL 119
            QV  DDG+++S A+NA+ LALL+AG+EM G+  S+T C           S+ +DPS  EE+++ A A+ +  S +  ++  + +G +++++YF   + A++    + SF++L+ + +I+
Sbjct:  110 QVFSDDGSIVSCAINAACLALLDAGIEMNGLLGSVTLCFNN------DGSIYVDPSTEEENQSKAIAIYSFSSINKNIVLSKTIGTLTEDQYFKGLDKASESCDLIISFIKLAVKNRIM 222          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A833WKX0_PHYIN (3' exoribonuclease family domain 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WKX0_PHYIN)

HSP 1 Score: 63.9 bits (154), Expect = 1.170e-9
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    1 QVIVDDGAV--------LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQK 117
            QVI D+G++         + A+NA +LAL++AGV M  +  + +C I          ++ LDP+ AEE EA++    A  S S GVL+C   G +S+E+YFAC EA  + + +V +F R+  ++K
Sbjct:  125 QVIEDNGSISFPLFLIIAALAINAVSLALMDAGVPMLSVVTATSCSIFD------DGNLYLDPTAAEEEEAVSWVTTARSSTSDGVLTCITNGLLSEEQYFACSEACQRASESVAAFFRIVQQKK 243          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A6G0WBP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.760e-9
Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 0
Query:    1 QVIVDDGAVLSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQK 117
            QV+ DDG++LS A+NA  LALL+AG+ M  +  ++TC I             LD S  E   A+A+   A    + G+L+    G +S+  YFAC E   +   +V SFVR+S E K
Sbjct:  112 QVVEDDGSLLSVAINAMNLALLDAGIPMRCLVGAVTCSILD------DGQFCLDSSLTEGEAAVASVTSACAGNNDGILTSLTTGVLSESHYFACSEICRRAVGSVLSFVRISQETK 222          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A0P1AC34_PLAHL (Exosomal 3'-5' exoribonuclease complex, subunit Rrp46 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC34_PLAHL)

HSP 1 Score: 61.2 bits (147), Expect = 5.210e-9
Identity = 38/108 (35.19%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   10 LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQK 117
            +S A+NA +LAL++AGV M  +  + +C I       +  ++ LDP+ AEE +A++  + A   ++ GVL+C   G +S+E+YFAC EA  + + +V  F R+  ++K
Sbjct:   76 ISIAINAVSLALMDAGVPMASVVTATSCSIA------MDGNLYLDPTSAEEEKAVSWVISARSCSNDGVLTCITNGLLSEEQYFACSEACQRASESVAVFFRIVHQKK 177          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: A0A5D6XHQ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHQ5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.290e-9
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   10 LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQK 117
            LS A+NA +LALL+AGV MT +  S TC   G+   G   ++ LDPS+AEE  + +    A  S S  VL+    G +++E+YFAC EA  +   +V +F R+  ++K
Sbjct:  111 LSVAINAVSLALLDAGVPMTSVVTSATC---GLLPDG---TLFLDPSQAEEELSTSLVTTACSSTSDSVLTSLTNGLLTEEQYFACSEACRRAAESVHAFFRIVQQKK 212          
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Match: K3WUR4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUR4_GLOUD)

HSP 1 Score: 61.2 bits (147), Expect = 8.390e-9
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   10 LSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRSVILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAAQGTTAVRSFVRLSAEQKILREA 122
            LS A+NA +LALL+AGV M  I  S TC   G+   G   ++ LDPS AEE  + +    A  S + GVL+    G +++E+YFAC EA  + + +V +F+R+  ++K   EA
Sbjct:  113 LSVAINAVSLALLDAGVPMLSIVTSATC---GLLPDG---NLFLDPSLAEEELSTSLVTTACSSTNDGVLTSLTKGLLTEEQYFACSEACQRASESVHAFLRIVQQKKYPIEA 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162549.3969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT2_ECTSI1.680e-5380.95RNase_PH domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZF16_9STRA2.470e-1642.42Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
F0W748_9STRA4.410e-1138.74Uncharacterized protein AlNc14C28G2677 n=1 Tax=Alb... [more]
A0A3R7JMF0_9STRA2.720e-1038.89RNase_PH_C domain-containing protein (Fragment) n=... [more]
Q54Q83_DICDI3.780e-1031.93Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A833WKX0_PHYIN1.170e-936.003' exoribonuclease family domain 2 n=1 Tax=Phytoph... [more]
A0A6G0WBP6_9STRA4.760e-937.61Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0P1AC34_PLAHL5.210e-935.19Exosomal 3'-5' exoribonuclease complex, subunit Rr... [more]
A0A5D6XHQ5_9STRA8.290e-939.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WUR4_GLOUD8.390e-939.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..122
e-value: 1.0E-22
score: 82.6
NoneNo IPR availablePANTHERPTHR11953:SF1EXOSOME COMPLEX COMPONENT RRP46coord: 1..118
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 1..118
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 30..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162549contigH-elongata_contig162549:221..601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162549.3969.1mRNA_H-elongata_contig162549.3969.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162549 221..601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162549.3969.1 ID=prot_H-elongata_contig162549.3969.1|Name=mRNA_H-elongata_contig162549.3969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
QVIVDDGAVLSAALNASTLALLNAGVEMTGIALSLTCCITGISGSGIGRS
VILDPSKAEESEAIATAVVATLSASGGVLSCRAVGAMSKEEYFACCEAAA
QGTTAVRSFVRLSAEQKILREAETVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR036345ExoRNase_PH_dom2_sf