prot_H-elongata_contig16024.3868.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16024.3868.1
Unique Nameprot_H-elongata_contig16024.3868.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig16024.3868.1 vs. uniprot
Match: D8LJW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW2_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 4.150e-80
Identity = 123/193 (63.73%), Postives = 148/193 (76.68%), Query Frame = 0
Query:    1 VEVVACPASCPTPPGVPIRTFYDASAKKSAARGVAVSPCEGDVEQRGMSCTSLGGLPAYATSVLPIRFTNEQVQLNEACLFRLNIDADWVETEVIAIECRLMNRPLLEGDDAPAPTEGGDTGSRDMPHEEE--LKEVGKLALHVKCAAARGGLHRYHPLVFPQPHLCQLDFTLHMALTAMNHSGGPAGLSAAI 191
            VE V  P S P  PGVP+RTF+D SA++S ARGV V+P EGDV+QRG S  S  GLP+Y +S+LPIRFTNE+VQLNE CLFR++IDADWVET+VIAIE RL+  PL E D AP        G+   P ++   LKEVGK+ LH KCA+++GGLHRYHPLVF QPHLC +D TLHMALT++NH GGPAGL+AAI
Sbjct:   16 VEAVVFPVSNPYAPGVPVRTFHDPSARRSTARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAAAGATVTPEKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAI 208          
BLAST of mRNA_H-elongata_contig16024.3868.1 vs. uniprot
Match: A0A7R9YF49_9STRA (Hypothetical protein n=4 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF49_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.630e-6
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   58 AYATSVLPIRFTNEQVQLNEACLFRLNIDADWVETEVIAIECRLMNRPLLEGDDAPAPTEGGDTGSRDMPHEEELKEVGKLALHVKCAAARGGLHRYHPLVFPQPHLCQLDFTLHMALT 176
            +Y T V+PIR+ +E V+LNE   F+L   AD  +T+   +   L   P ++G ++ +  +        +P + + + V    L ++  A   GLH ++P+ F   HLC+++ T H  +T
Sbjct:   81 SYVTRVIPIRYRDETVELNEGAHFQLTFPADQADTDA-ELHVALFFCPFVKGVESRSLADL-------IPPQPQFECVATQRLLIRQVAR--GLHAFYPVTFDDMHLCEVEMTFHTLVT 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16024.3868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJW2_ECTSI4.150e-8063.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7R9YF49_9STRA1.630e-628.57Hypothetical protein n=4 Tax=Pinguiococcus pyrenoi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16024contigH-elongata_contig16024:3072..4889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16024.3868.1mRNA_H-elongata_contig16024.3868.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16024 3072..4889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16024.3868.1 ID=prot_H-elongata_contig16024.3868.1|Name=mRNA_H-elongata_contig16024.3868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
VEVVACPASCPTPPGVPIRTFYDASAKKSAARGVAVSPCEGDVEQRGMSC
TSLGGLPAYATSVLPIRFTNEQVQLNEACLFRLNIDADWVETEVIAIECR
LMNRPLLEGDDAPAPTEGGDTGSRDMPHEEELKEVGKLALHVKCAAARGG
LHRYHPLVFPQPHLCQLDFTLHMALTAMNHSGGPAGLSAAISAT
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