prot_H-elongata_contig16001.3859.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16001.3859.1
Unique Nameprot_H-elongata_contig16001.3859.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: D8LI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI90_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 7.190e-23
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 GLVPVSSSLEKWMIASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQLFLSGCVLLNVVV-FHLGEPSDVVCAARPWVLHVGLTFT 87
            G +P+ S L   ++  + FAG+YA +   WI + R  VIVKLSQPFVCQLFL+GC+LLN+   F +G  SD  C  +PW+LH+GLTFT
Sbjct:  336 GYIPLKSDLGTTIVVCAAFAGLYAAVILWWIRRERWAVIVKLSQPFVCQLFLAGCILLNITAAFLVGVASDPSCVMQPWMLHIGLTFT 423          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A7S2XWQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.140e-15
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:    3 VPVSSSLEKWMIASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQLFLSGCVLLNVVVFHL-GEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRV 101
            +P  S++   M A S    +    +  WI +HR   +VK+SQP  C LF  G ++ N+ +  L G+PSD +C  RPW+ H+ +TFT SCL +K + V R+
Sbjct:  112 LPRESTVGWTMTAFSTIGTVICLFWLVWIYEHRAFSVVKMSQPLFCGLFALGGLVCNLSLLALLGKPSDALCRIRPWLQHLPITFTYSCLLVKIFHVWRI 211          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A0D2WRC7_CAPO3 (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WRC7_CAPO3)

HSP 1 Score: 69.7 bits (169), Expect = 1.850e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   18 IFAGIYATLYFGWI---MQHRQTVIVKLSQPFVCQLFLSGCVLLNVVVFHLGE-PSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLSRISIKD 115
            + A I+  + FG++   M++  + I+  S P    L L G +L  V +F     P+D +CAA PWV H+G  F    L+LKTYR+ R+FN+ A + RI +KD
Sbjct: 1234 VLAAIFILIAFGFLLFLMRNWSSRIIVASSPTFLALILFGALLSYVWIFLAAPTPTDALCAAMPWVRHLGFCFVFGALFLKTYRIDRIFNNDA-IKRIRMKD 1334          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A835YYF4_9STRA (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.860e-9
Identity = 38/114 (33.33%), Postives = 54/114 (47.37%), Query Frame = 0
Query:    3 VPVSSSLEKWMIASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQLFLSGCVLLNVVVFHLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLSRISIKDR 116
            +P++S     + A + F  +YA  +  +I             P  C +FL GC  L           D VC ARPW+ HV LTFT SC+ +K +R  R+F+    L RI I +R
Sbjct:  894 IPLASRAGAGLTALAAFTALYAGGFAAFI-------------PLFCGMFLGGCAAL--------AGRDAVCMARPWLQHVLLTFTLSCILVKLHRAWRLFSFKNGLKRIKISNR 986          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A0G4J476_PLABS (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J476_PLABS)

HSP 1 Score: 55.8 bits (133), Expect = 1.280e-6
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   31 IMQHRQTVIVKLSQPFVCQLFLSGCVLLNV--VVFHLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVA 106
            I++HRQ+  +K   P +  L L+G VLL+   + F     SD++C  R W+  +G   T + L++KTYR+ R+FNS++
Sbjct:  556 IVRHRQSTRIKAFSPPLLLLSLAGAVLLSSASLTFAFLPASDLLCQWRWWMTALGFIVTFAPLFIKTYRINRIFNSLS 633          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A0D2WJ31_CAPO3 (G_PROTEIN_RECEP_F3_4 domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ31_CAPO3)

HSP 1 Score: 55.1 bits (131), Expect = 2.080e-6
Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   35 RQTVIVKLSQPFVCQLFLSGCVLLNVVVF--HLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLSRISIKDR 116
            R+  I++ + P   +L L G V+  + +F  +  +PS   C AR W+ H+G     + L+LKTYR+ RVF  V       + DR
Sbjct:   14 RRVRIIQSASPVYLELILLGAVMSMLWIFLDYSDDPSSSQCTARVWMRHLGFGVMFAALFLKTYRIARVFQQVTVSRSTPLSDR 97          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A6V1PF52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PF52_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 4.430e-6
Identity = 32/112 (28.57%), Postives = 52/112 (46.43%), Query Frame = 0
Query:    3 VPVSSSLEKWMIASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQLFLSGCVLLNVV-VFHLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLSRISI 113
            VP +S+  + + A          +  G ++  R+T  +K SQP    +F+   V +    V  LG P+   C  R W+ H+  T     L+LK YRV R+F +   L R+ +
Sbjct:  523 VPFASATGRAVCAVCTLGAGVGLVLLGAVVALRRTPDIKASQPVFLGIFVGAAVAVTASNVLGLGPPTAATCLGRAWLFHLAFTAMFGALFLKAYRVWRIFGN-KNLRRVKV 633          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A0D2X112_CAPO3 (G_PROTEIN_RECEP_F3_4 domain-containing protein n=4 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X112_CAPO3)

HSP 1 Score: 53.5 bits (127), Expect = 8.190e-6
Identity = 34/113 (30.09%), Postives = 57/113 (50.44%), Query Frame = 0
Query:    2 LVPVSSSLEKWMIASSIFAGIYATL--YFGWIMQH-RQTVIVKLSQPFVCQLFLSGCVLLNVVVF--HLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLS 109
            L+  +S+     +A  + AG+   L    G +  H R+  I++ + P    L L G V+  + +F  +  +PS   C AR W+ H+G +   + L+LKTYR+ RVF +    S
Sbjct:  416 LITPASTSSAARVALFVLAGLIVLLCMIMGLMTWHFRRIRIIQSASPTYLLLILFGAVMSMLWIFLDYSDDPSTAQCTARVWMRHLGFSIMFTALFLKTYRIARVFKATVTKS 528          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: A0A0D2WRZ4_CAPO3 (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WRZ4_CAPO3)

HSP 1 Score: 52.8 bits (125), Expect = 1.520e-5
Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0
Query:   35 RQTVIVKLSQPFVCQLFLSGCVLLNVVVF--HLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLS 109
            R+  I++ + P    L L G V+  + +F  +  +PS   C AR W+ H+G +   S L+LKTYR+ RVF +    S
Sbjct:  436 RRIRIIQSASPTYLLLILFGAVMSMLWIFLDYSDDPSTAQCTARVWMRHLGFSIMFSALFLKTYRIARVFKATVTKS 512          
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Match: K3X561_GLOUD (G_PROTEIN_RECEP_F3_4 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X561_GLOUD)

HSP 1 Score: 51.6 bits (122), Expect = 3.910e-5
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 0
Query:   14 IASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQLFLSGCVLLNV-VVFHLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQRVFNSVAKLSRISI 113
            I S +  G+   L   ++   R+  I+K SQ  + +L + G +L+ +  V + GEP++V+CAARP ++  G T     L++K+ RV RVF   + + R+ I
Sbjct:  586 ITSGVLIGVLV-LAMVFVFVCRKAPIIKRSQFELLELMIFGGILVCLSAVMYAGEPTNVLCAARPLLVSSGFTTIFGALFVKSLRVYRVFMK-SSMKRVKI 684          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16001.3859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LI90_ECTSI7.190e-2352.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XWQ9_9STRA3.140e-1538.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0D2WRC7_CAPO31.850e-1138.24G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
A0A835YYF4_9STRA6.860e-933.33G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
A0A0G4J476_PLABS1.280e-637.18G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
A0A0D2WJ31_CAPO32.080e-633.33G_PROTEIN_RECEP_F3_4 domain-containing protein n=2... [more]
A0A6V1PF52_HETAK4.430e-628.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0D2X112_CAPO38.190e-630.09G_PROTEIN_RECEP_F3_4 domain-containing protein n=4... [more]
A0A0D2WRZ4_CAPO31.520e-535.06G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]
K3X561_GLOUD3.910e-532.67G_PROTEIN_RECEP_F3_4 domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 26..107
e-value: 7.0E-18
score: 65.2
IPR002455GPCR family 3, GABA-B receptorPANTHERPTHR10519GABA-B RECEPTORcoord: 4..116
NoneNo IPR availablePANTHERPTHR10519:SF20GAMMA-AMINOBUTYRIC ACID TYPE B RECEPTOR SUBUNIT 2coord: 4..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 45..64
NoneNo IPR availableTMHMMTMhelixcoord: 74..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16001contigH-elongata_contig16001:5447..6783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16001.3859.1mRNA_H-elongata_contig16001.3859.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16001 5447..6783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16001.3859.1 ID=prot_H-elongata_contig16001.3859.1|Name=mRNA_H-elongata_contig16001.3859.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
GLVPVSSSLEKWMIASSIFAGIYATLYFGWIMQHRQTVIVKLSQPFVCQL
FLSGCVLLNVVVFHLGEPSDVVCAARPWVLHVGLTFTCSCLYLKTYRVQR
VFNSVAKLSRISIKDRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
IPR002455GPCR3_GABA-B