prot_H-elongata_contig159800.3852.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159800.3852.1
Unique Nameprot_H-elongata_contig159800.3852.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
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BLAST of mRNA_H-elongata_contig159800.3852.1 vs. uniprot
Match: A0A6H5KA25_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA25_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.640e-27
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 0 
Query:    1 QTLTFGDYRRATLVEWGSIWLASLGVVGWNATLAFRHARRVWYKIAVAIVAPCLALLVKSVASYLYKEIVLQPELGSPESLALPRSRFKYVSGLKV 96
            +TLTFGDYRR +L+E   + LA++G VGW     FR +RR W K+AVAIVAP +A +V+SV  YLY+EIVLQP+L SPES+A P SRF+ V GLKV
Sbjct:   93 ETLTFGDYRRPSLLESCVLALAAVGPVGWKTLSTFRKSRRTWAKVAVAIVAPAVAWVVRSVLGYLYREIVLQPKLRSPESVAFPNSRFEDVGGLKV 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159800.3852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA25_9PHAE4.640e-2760.42Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..35
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 45..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159800contigH-elongata_contig159800:13..842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159800.3852.1mRNA_H-elongata_contig159800.3852.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159800 13..842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159800.3852.1 ID=prot_H-elongata_contig159800.3852.1|Name=mRNA_H-elongata_contig159800.3852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
QTLTFGDYRRATLVEWGSIWLASLGVVGWNATLAFRHARRVWYKIAVAIV
APCLALLVKSVASYLYKEIVLQPELGSPESLALPRSRFKYVSGLKV
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