prot_H-elongata_contig157245.3729.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157245.3729.1
Unique Nameprot_H-elongata_contig157245.3729.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig157245.3729.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.480e-16
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:    1 AGNWGDSTFKAETLVRPDILLAILRQGHRVLWTDVDMVWLGNPL 44
            AG WGD  FK ET+VRPDILL+I+ QG++VLWTDVD+VWLGNPL
Sbjct: 1286 AGQWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPL 1329
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BLAST of mRNA_H-elongata_contig157245.3729.1 vs. uniprot
Match: D8LU02_ECTSI (Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU02_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.950e-13
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    1 AGNWGDSTFKAETLVRPDILLAILRQGHRVLWTDVDMVWLGNPL 44
            AG WGD+ FK +T+ RPDILL ILRQG++ L+TDVD+ WLGN L
Sbjct:  346 AGQWGDNIFKQQTVARPDILLPILRQGYKALYTDVDIFWLGNVL 389
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BLAST of mRNA_H-elongata_contig157245.3729.1 vs. uniprot
Match: D3BL64_POLPP (WD40 repeat-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BL64_POLPP)

HSP 1 Score: 49.3 bits (116), Expect = 1.460e-5
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 AGNWGDSTFKAETLVRPDILLAILRQGHRVLWTDVDMVWLGNP 43
            A ++G+  F+A    +P ++L +L++G+ VLWTD D+VWLG P
Sbjct:  165 AESYGNVGFRAICNEKPLVVLDVLKRGYNVLWTDTDIVWLGEP 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157245.3729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0G0_9PHAE1.480e-1675.00Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D8LU02_ECTSI4.950e-1365.91Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus... [more]
D3BL64_POLPP1.460e-544.19WD40 repeat-containing protein n=1 Tax=Polysphondy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 2..44
e-value: 4.4E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR47032FAMILY NOT NAMEDcoord: 3..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157245contigH-elongata_contig157245:805..936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157245.3729.1mRNA_H-elongata_contig157245.3729.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157245 805..936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157245.3729.1 ID=prot_H-elongata_contig157245.3729.1|Name=mRNA_H-elongata_contig157245.3729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
AGNWGDSTFKAETLVRPDILLAILRQGHRVLWTDVDMVWLGNPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase