prot_H-elongata_contig156501.3684.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_PHATC (Photosystem II reaction center protein L n=87 Tax=cellular organisms TaxID=131567 RepID=PSBL_PHATC) HSP 1 Score: 77.0 bits (188), Expect = 4.770e-18 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
MTGPNPNKQ VELNRTSLYWGLLLIFVLAVLFSSYFFN
Sbjct: 1 MTGPNPNKQAVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_CYAM1 (Photosystem II reaction center protein L n=7 Tax=Eukaryota TaxID=2759 RepID=PSBL_CYAM1) HSP 1 Score: 76.3 bits (186), Expect = 9.630e-18 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+GPNPNKQPVELNRTSLYWGLL IFVLA+LFSSYFFN
Sbjct: 1 MSGPNPNKQPVELNRTSLYWGLLCIFVLAILFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_GRATL (Photosystem II reaction center protein L n=137 Tax=Florideophyceae TaxID=2806 RepID=PSBL_GRATL) HSP 1 Score: 75.9 bits (185), Expect = 1.370e-17 Identity = 35/38 (92.11%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+GPNPNK+PVELNRTSL+WGLLLIFVLAVLFSSYFFN
Sbjct: 1 MSGPNPNKEPVELNRTSLFWGLLLIFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: A0A516ZAF7_9STRA (Photosystem II reaction center protein L n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZAF7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.950e-17 Identity = 35/38 (92.11%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+GPNPN+QPVEL+RTSLYWGLLLIFVLAVLFSSYFFN
Sbjct: 1 MSGPNPNRQPVELSRTSLYWGLLLIFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_EMIHU (Photosystem II reaction center protein L n=5 Tax=cellular organisms TaxID=131567 RepID=PSBL_EMIHU) HSP 1 Score: 75.1 bits (183), Expect = 2.770e-17 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+ PNPNKQPVELNRTSLYWGLLL+FVLAVLFSSYFFN
Sbjct: 1 MSAPNPNKQPVELNRTSLYWGLLLMFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: C6KIX9_9STRA (Photosystem II reaction center protein L n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=C6KIX9_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.770e-17 Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
MTGPNPN+QPVELNRTSLY+GLLLIFVLAVLFSSYFFN
Sbjct: 1 MTGPNPNRQPVELNRTSLYFGLLLIFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: D4NY75_GALSU (Photosystem II reaction center protein L n=15 Tax=Eukaryota TaxID=2759 RepID=D4NY75_GALSU) HSP 1 Score: 74.3 bits (181), Expect = 5.590e-17 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
MTG NPNKQPVELNRTSL+WGLLLIFVLA+LFSSYFFN
Sbjct: 1 MTGSNPNKQPVELNRTSLFWGLLLIFVLALLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: A0A8K1YUB7_9FLOR (Photosystem II protein L n=2 Tax=Kumanoa TaxID=644269 RepID=A0A8K1YUB7_9FLOR) HSP 1 Score: 74.3 bits (181), Expect = 1.170e-16 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+GPNPNK PVELNRTSL+WGLLLIFVLAVLFSSYFFN
Sbjct: 33 MSGPNPNKVPVELNRTSLFWGLLLIFVLAVLFSSYFFN 70
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_CYACA (Photosystem II reaction center protein L n=67 Tax=Eukaryota TaxID=2759 RepID=PSBL_CYACA) HSP 1 Score: 73.2 bits (178), Expect = 1.610e-16 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
M+G NPNKQPVELNRTSL+WGLLLIFVLAVLFSSYFFN
Sbjct: 1 MSGINPNKQPVELNRTSLFWGLLLIFVLAVLFSSYFFN 38
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Match: PSBL_PHYPA (Photosystem II reaction center protein L n=237 Tax=Embryophyta TaxID=3193 RepID=PSBL_PHYPA) HSP 1 Score: 72.8 bits (177), Expect = 2.280e-16 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
Query: 1 MTGPNPNKQPVELNRTSLYWGLLLIFVLAVLFSSYFFN 38
MT PNPNKQ VELNRTSLYWGLLLIFVLAVLFS+YFFN
Sbjct: 1 MTQPNPNKQSVELNRTSLYWGLLLIFVLAVLFSNYFFN 38 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156501.3684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig156501.3684.1 ID=prot_H-elongata_contig156501.3684.1|Name=mRNA_H-elongata_contig156501.3684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bpback to top |