prot_H-elongata_contig156375.3677.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156375.3677.1
Unique Nameprot_H-elongata_contig156375.3677.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length262
Homology
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: D8LFY1_ECTSI (Diphthine--ammonia ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY1_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 3.520e-70
Identity = 153/285 (53.68%), Postives = 173/285 (60.70%), Query Frame = 0
Query:    1 RWFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTLPPRPSYSPPAVAAPAGTKSAPWRSATGVACLEVGGSFHGAELKLCVSHASAVASAVGASLARGCVFATLYVSEEA------------------AKAARAEAAGSRSPGVKCGREKSSRGNGAKAGGSCGXXXXXXXXXX-----VXECXSLMEARSGQEEAEARAEKASMGLQGDEDDDSAEEGWTSDPE 262
            +WF+G NPPSRSCV+VPLP GC +MLD+VALRGSG AL +EG+AC  RQVLHVRSIS+WAPVCIGPYCQANTL PG    L+AGQIGLQ ASMT P R S  PP   A           AT    +      H  EL LCVSHAS+VASAVGAS++RGCVFATLYVSEEA                  AKA   +           GR  + R + + AG S G X             V EC  LME R  QE+AEA AE A  G +G ED DSAE+GWTSDPE
Sbjct:  311 KWFEGENPPSRSCVSVPLPLGCSVMLDLVALRGSGEALAKEGAACAQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALVAGQIGLQAASMTFPARRSGRPPVPCA---------GGATSKEAISERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSEEAXXXXXXXXXXXXXXVAAHAKAGAMDRTDEEGAVAGEGRGDTRRTSSSDAGTSAGAXAPAGGSGGCLEGMVDECRVLMEGRLSQEQAEAAAEAA--GTEGGEDGDSAEDGWTSDPE 584          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A6H5K721_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K721_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 5.980e-54
Identity = 143/262 (54.58%), Postives = 155/262 (59.16%), Query Frame = 0
Query:   25 MLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTLPPRPSYSPPAVAAPAGTKSAPWRSATGVACLEVGGSFHGAELKLCVSHASAVASAVGASLARGCVFATLYVSEEA---------AKAARA---------EAAGSRSPGVKCGREKSSR------GNGAKAGGSCGXXXXXXXXXXVXECXSLMEARSGQEEAEARAEKASMGLQGDEDDDSAEEGWTSDPE 262
            MLD+VALRGSG AL +EG+AC  RQVLHVRSIS+WAPVCIGPYCQANTL PG    L+AGQIGLQ ASMT P R S  PPA  A  G+ S    S T           H  EL LCVSHAS+VASAVGAS++RGCVFATLYVSEEA         A  A A         E  G    G    R  SS       G  A AGGS G          V EC  LME +  QE+AEA AE A     G EDDDSAE+GWTSDPE
Sbjct:    1 MLDLVALRGSGEALAKEGAACAQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALVAGQIGLQAASMTFPARRSGRPPAPCA-GGSASKEAMSETRP--------IHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSEEAXXXXXXXXTAAVAHATAGVMDRTDEEGGVAGEGRGDTRRPSSSDAGTSAGAAAPAGGSGGSLEGM-----VDECRVLMEGKLTQEQAEAAAEVAGT-EGGGEDDDSAEDGWTSDPE 247          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A835YTU4_9STRA (Diphthine--ammonia ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTU4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-18
Identity = 67/163 (41.10%), Postives = 80/163 (49.08%), Query Frame = 0
Query:    8 PPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTLPPRPSYSPPAVAAPAGTKSAPWRSATGVACLEVGGSFHGAELKLCVSHASAVASAVGASLARGCVFATLYVSEEA 170
            PPSR+CV   LP    +MLD VA RGS     R     + R  L VRS+S WAPVCIGPY QAN L    A+ L++GQIGL P SM + P                                G   G EL  CV HA+ V  A+GAS +R  + ATLYV+  A
Sbjct:  321 PPSRACVQARLPPPYAVMLDCVAQRGSAP---RPRGPAQDRATLLVRSLSPWAPVCIGPYSQANCLVGSGALVLLSGQIGLLPCSMAVAP--------------------------------GGLDG-ELGWCVRHAARVLRALGASASRSVLCATLYVTASA 447          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: K8YYW5_NANGC (Diphthine--ammonia ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYW5_NANGC)

HSP 1 Score: 94.7 bits (234), Expect = 2.380e-18
Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    3 FDGVNPPSRSCVAVPLP------SGC--W----IMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            F   +PPSRSCV +PL         C  W    ++LDV+AL GSGAA+  +  + + RQVLHV+S+S WAPVCIGPY QAN L+ G+ +  +AGQIGL PA+M L
Sbjct:  326 FHPHHPPSRSCVELPLARPYDDEEACRGWEEVEVLLDVMALAGSGAAM--DAGSFQPRQVLHVKSLSGWAPVCIGPYSQANLLSHGH-LAFLAGQIGLDPATMVL 427          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A1V9YW44_9STRA (Diphthine--ammonia ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YW44_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.940e-16
Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 0
Query:    2 WFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTLPPRPSYS 102
            +F G++PPSRSCV + + +   + +D +ALRG+G  L         R VLHV+S+S WAP+CIGPY QA+T+A   ++ L AGQI L+PA+M L P P+ +
Sbjct:  354 YFPGLHPPSRSCVQLDMAAA--VQIDCLALRGAG--LNPRVPTPVQRSVLHVQSLSEWAPMCIGPYSQASTVA--QSVVLCAGQIPLEPATMALLPAPTLA 448          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A250XPR4_9CHLO (Diphthine--ammonia ligase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XPR4_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 1.070e-15
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    1 RWFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            + F  + PPSR+ V VPLPSGC ++LD++  R S  A    G     R VLHV+SIS+WAP CIGPY QA T      I  +AGQI L P+SMTL
Sbjct:  377 KTFPSLEPPSRATVQVPLPSGCPLLLDLLLARPSPGASHLVG-----RTVLHVQSISSWAPSCIGPYSQATTY---RGICYLAGQIPLLPSSMTL 463          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A7S1VFR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFR5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.070e-15
Identity = 51/109 (46.79%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    2 WFDGVNPPSRSCVAVP---LPSGCWIMLDVVALRGSG------------AALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            +F    PPSRS VA+    LP G  ++LD +   GSG            AA   + +  + RQVLHV+SIS WAPVC+GPY Q NTL   +AI L+AGQIGL P++M L
Sbjct:   28 FFGTTLPPSRSTVAIGKGVLPGGRRVLLDCLVQLGSGGYMRQNAASNKMAAAALQTTTSKLRQVLHVQSISYWAPVCVGPYSQVNTLR--SAIHLLAGQIGLVPSTMKL 134          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A383WGJ8_TETOB (Diphthine--ammonia ligase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGJ8_TETOB)

HSP 1 Score: 85.9 bits (211), Expect = 2.860e-15
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    1 RWFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            R    V+PPSR+CV VPLP+GC ++LDV+  R       ++      R+VLHV+SIS+WAP CIGPY QA +    N +  +AGQI L PASM +
Sbjct:  397 RHLPQVDPPSRACVQVPLPAGCPVLLDVLFARQPDQQQQQQPL---DRRVLHVQSISSWAPSCIGPYSQATSC---NGLIYMAGQIPLDPASMAI 485          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A1W0A4Q7_9STRA (Diphthine--ammonia ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4Q7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.020e-14
Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    2 WFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            +F G+ PPSRSCV V + +   + +D +A+RG+G       +    R+VL+++S+S WAP+CIGPYCQANT++   ++   AGQI L+P +MT+
Sbjct:  353 YFPGLTPPSRSCVQVDMENT--LQIDCLAIRGAGPCSTI--TIATQREVLYIQSLSEWAPMCIGPYCQANTVS--KSVIFCAGQIPLKPETMTM 440          
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Match: A0A7S2KWY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWY5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.360e-14
Identity = 48/106 (45.28%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    2 WFDGVNPPSRSCVAVP---LPSGCWIMLDVVALRGSGAAL---------LREGSACEHRQVLHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTL 95
            +F    PPSRSCVA+    +P    ++LD+ A + SG A+         L   S    R+VLHV+ IS WAPVC+GPY QANT+  G  +T++AGQIGL P +M L
Sbjct:   93 FFGAELPPSRSCVAIGEGVIPGNRRVLLDLCAQKSSGKAMRSNDGGTKQLLHSSGNLLREVLHVQGISYWAPVCVGPYSQANTVRGG--MTMLAGQIGLDPPTMAL 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156375.3677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFY1_ECTSI3.520e-7053.68Diphthine--ammonia ligase n=1 Tax=Ectocarpus silic... [more]
A0A6H5K721_9PHAE5.980e-5454.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTU4_9STRA1.240e-1841.10Diphthine--ammonia ligase n=1 Tax=Tribonema minus ... [more]
K8YYW5_NANGC2.380e-1851.43Diphthine--ammonia ligase n=3 Tax=Monodopsidaceae ... [more]
A0A1V9YW44_9STRA3.940e-1646.53Diphthine--ammonia ligase n=1 Tax=Achlya hypogyna ... [more]
A0A250XPR4_9CHLO1.070e-1551.58Diphthine--ammonia ligase n=1 Tax=Chlamydomonas eu... [more]
A0A7S1VFR5_9STRA2.070e-1546.79Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A383WGJ8_TETOB2.860e-1548.42Diphthine--ammonia ligase n=2 Tax=Tetradesmus obli... [more]
A0A1W0A4Q7_9STRA1.020e-1443.62Diphthine--ammonia ligase n=1 Tax=Thraustotheca cl... [more]
A0A7S2KWY5_9STRA1.360e-1445.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 42..188
e-value: 6.7E-13
score: 50.7
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 51..178
IPR030662Diphthine--ammonia ligase/Uncharacterised protein MJ0570PANTHERPTHR12196DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEINcoord: 2..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156375contigH-elongata_contig156375:1..1489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156375.3677.1mRNA_H-elongata_contig156375.3677.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156375 1..1489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156375.3677.1 ID=prot_H-elongata_contig156375.3677.1|Name=mRNA_H-elongata_contig156375.3677.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
RWFDGVNPPSRSCVAVPLPSGCWIMLDVVALRGSGAALLREGSACEHRQV
LHVRSISNWAPVCIGPYCQANTLAPGNAITLIAGQIGLQPASMTLPPRPS
YSPPAVAAPAGTKSAPWRSATGVACLEVGGSFHGAELKLCVSHASAVASA
VGASLARGCVFATLYVSEEAAKAARAEAAGSRSPGVKCGREKSSRGNGAK
AGGSCGKGGGEWLRGMVEECRSLMEARSGQEEAEARAEKASMGLQGDEDD
DSAEEGWTSDPE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR030662DPH6/MJ0570