prot_H-elongata_contig155665.3647.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155665.3647.1
Unique Nameprot_H-elongata_contig155665.3647.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.400e-17
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    2 VVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            VVFATETLAAGVNMPARATVITTLSKRIDTGIVKL+PSQLLQMGGR
Sbjct:  710 VVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 755          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.130e-13
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            KVVFATETLAAGVNMPAR+TVI+ LSKR DTGI+ L PSQLLQM GR
Sbjct:  550 KVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGR 596          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A2P2KHL0_RHIMU (DEAD-box ATP-dependent RNA helicase ISE2ic-like n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KHL0_RHIMU)

HSP 1 Score: 67.8 bits (164), Expect = 5.030e-12
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            KVVFATETLAAG+NMPAR  VI++LSKRI TG ++LSP++LLQM GR
Sbjct:  128 KVVFATETLAAGINMPARTAVISSLSKRIGTGRIQLSPNELLQMAGR 174          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A7S3S2D9_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S2D9_EMIHU)

HSP 1 Score: 65.1 bits (157), Expect = 9.220e-12
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            KVVFATETLAAG+NMPAR TV+TTLSKR D G+  L+ S LLQM GR
Sbjct:  126 KVVFATETLAAGINMPARTTVVTTLSKRGDRGVEPLAASALLQMAGR 172          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A200QV60_9MAGN (Helicase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QV60_9MAGN)

HSP 1 Score: 67.0 bits (162), Expect = 9.390e-12
Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            K+VFATETLAAG+NMPAR TVI++LSKR ++G ++LSP++LLQM GR
Sbjct:  471 KIVFATETLAAGINMPARTTVISSLSKRCESGRIQLSPNELLQMAGR 517          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A7S0JFP4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JFP4_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 1.190e-11
Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            K VFATETLAAG+NMPAR TVIT LSKR D GI  LS SQLLQM GR
Sbjct:  287 KAVFATETLAAGINMPARTTVITVLSKRGDLGIAPLSASQLLQMSGR 333          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A4Y7L6N2_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L6N2_PAPSO)

HSP 1 Score: 66.6 bits (161), Expect = 1.280e-11
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            KV+FATETLAAG+NMPAR  VI++LSKR +TG ++LSP++LLQM GR
Sbjct:  524 KVIFATETLAAGINMPARTAVISSLSKRCETGRIQLSPNELLQMAGR 570          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: K8YRA8_NANGC (Type iii restriction res subunit n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRA8_NANGC)

HSP 1 Score: 66.2 bits (160), Expect = 1.620e-11
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            +VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GR
Sbjct:  126 RVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGR 172          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.750e-11
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            +VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GR
Sbjct:  590 RVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGR 636          
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Match: A0A6A3BBU3_HIBSY (DEAD-box ATP-dependent RNA helicase ISE2 n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BBU3_HIBSY)

HSP 1 Score: 66.2 bits (160), Expect = 1.750e-11
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR 47
            KVVFATETLAAG+NMPAR  VI++LSKR  TG ++LSP++LLQM GR
Sbjct:  529 KVVFATETLAAGINMPARTAVISSLSKRTSTGRIQLSPNELLQMAGR 575          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155665.3647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G373_ECTSI1.400e-1797.83DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z819_9STRA4.130e-1382.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P2KHL0_RHIMU5.030e-1274.47DEAD-box ATP-dependent RNA helicase ISE2ic-like n=... [more]
A0A7S3S2D9_EMIHU9.220e-1274.47Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A200QV60_9MAGN9.390e-1270.21Helicase n=1 Tax=Macleaya cordata TaxID=56857 RepI... [more]
A0A7S0JFP4_9EUKA1.190e-1178.72Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A4Y7L6N2_PAPSO1.280e-1170.21Uncharacterized protein n=2 Tax=Papaver somniferum... [more]
K8YRA8_NANGC1.620e-1176.60Type iii restriction res subunit n=1 Tax=Nannochlo... [more]
A0A4D9D0G8_9STRA1.750e-1176.60Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A6A3BBU3_HIBSY1.750e-1172.34DEAD-box ATP-dependent RNA helicase ISE2 n=3 Tax=H... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..47
e-value: 2.1E-14
score: 55.2
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..47
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 1..47
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155665contigH-elongata_contig155665:36..176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155665.3647.1mRNA_H-elongata_contig155665.3647.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155665 36..176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155665.3647.1 ID=prot_H-elongata_contig155665.3647.1|Name=mRNA_H-elongata_contig155665.3647.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
KVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLSPSQLLQMGGR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase