prot_H-elongata_contig155653.3646.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155653.3646.1
Unique Nameprot_H-elongata_contig155653.3646.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
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BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Match: D7FUW9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 8.690e-10
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0 
Query:   10 LACHDGVEAAVMAYMRDGGIDLEMKEKK-RTPLLSACTNGHLNVAKVLISAGANIHACDDEDFTCLHAAAMGG 81
            LA   G   AV+A++    IDLE K    +TPL+  C  GH   A++LI  GA++HA DD DF CLHAA   G
Sbjct:  106 LASKCGNNGAVVAFLSSCSIDLEHKSATGKTPLVEVCWEGHKRTAELLIREGADVHAKDDADFCCLHAATYQG 178
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BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Match: A0A816GSA0_ADIRI (Hypothetical protein (Fragment) n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A816GSA0_ADIRI)

HSP 1 Score: 52.8 bits (125), Expect = 4.980e-6
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:   36 KKRTPLLSACTNGHLNVAKVLISAGANIHACDDEDFTCLHA 76
            + +TPL  AC  GHL++A VLI AGAN +  D+ED TCLHA
Sbjct:  241 RNQTPLFYACIEGHLDIALVLIRAGANAYHLDNEDQTCLHA 281
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BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Match: A0A815B6F4_ADIRI (Hypothetical protein n=5 Tax=Adineta ricciae TaxID=249248 RepID=A0A815B6F4_ADIRI)

HSP 1 Score: 52.8 bits (125), Expect = 5.490e-6
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:   36 KKRTPLLSACTNGHLNVAKVLISAGANIHACDDEDFTCLHA 76
            + +TPL  AC  GHL++A VLI AGAN +  D+ED TCLHA
Sbjct:  241 RNQTPLFYACIEGHLDIALVLIRAGANAYHLDNEDQTCLHA 281
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BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Match: UPI00201EB84D (uncharacterized protein LOC124125735 n=7 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EB84D)

HSP 1 Score: 50.1 bits (118), Expect = 5.090e-5
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:    9 HLACHDGVEAAVMAYMRDGGIDLEM--KEKKRTPLLSACTNGHLNVAKVLISAGANIHACDDEDFTCLHAAAM 79
            H AC  G E  V+  + D G+++E    + KRTPL+ AC +G L  AK L    A +   D+ +F+CLH AAM
Sbjct:  975 HRACMTG-ETNVVKILLDHGMNIEDVGSKFKRTPLMCACRHGKLETAKELKRRHAVLDIVDENNFSCLHLAAM 1046
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BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Match: A0A818T6Z1_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818T6Z1_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 6.750e-5
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 0 
Query:    7 LFHLACHDGVEAAVMAYMRDGGIDLEMKEKKRTPLLSACTNGHLNVAKVLISAGANIHACDDEDFTCLHA 76
            + H   +  V+  ++  M + G       K +TPL  AC  GH++VA +L+ AGAN +  D+++ TCLHA
Sbjct:  317 IIHELLNSSVDDEIILKMLNQG-----DHKNQTPLFYACIEGHIDVALILLHAGANAYHLDNDNQTCLHA 381
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155653.3646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUW9_ECTSI8.690e-1046.58Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A816GSA0_ADIRI4.980e-658.54Hypothetical protein (Fragment) n=1 Tax=Adineta ri... [more]
A0A815B6F4_ADIRI5.490e-658.54Hypothetical protein n=5 Tax=Adineta ricciae TaxID... [more]
UPI00201EB84D5.090e-541.10uncharacterized protein LOC124125735 n=7 Tax=Halio... [more]
A0A818T6Z1_9BILA6.750e-535.71Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 36..65
e-value: 7.3E-5
score: 32.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 36..68
score: 11.808
NoneNo IPR availablePFAMPF13637Ank_4coord: 38..81
e-value: 2.8E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR24188ANKYRIN REPEAT PROTEINcoord: 8..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..89
e-value: 4.4E-17
score: 64.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..84
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 3..89
score: 16.228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155653contigH-elongata_contig155653:206..472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155653.3646.1mRNA_H-elongata_contig155653.3646.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155653 206..481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155653.3646.1 ID=prot_H-elongata_contig155653.3646.1|Name=mRNA_H-elongata_contig155653.3646.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MSSRQVLFHLACHDGVEAAVMAYMRDGGIDLEMKEKKRTPLLSACTNGHL
NVAKVLISAGANIHACDDEDFTCLHAAAMGGCLDRGSVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom