prot_H-elongata_contig155266.3618.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155266.3618.1
Unique Nameprot_H-elongata_contig155266.3618.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
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BLAST of mRNA_H-elongata_contig155266.3618.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 9.670e-6
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    2 PHVGLVARLFTGIDTTSCQAERDFSALKLVVSDLHARL 39
            PH+ L+ARLF GI++TSCQAER+FSAL  ++  L + +
Sbjct:  412 PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSM 449
[Close]
BLAST of mRNA_H-elongata_contig155266.3618.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 9.750e-6
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    2 PHVGLVARLFTGIDTTSCQAERDFSALKLVVSDLHARL 39
            PH+ L+ARLF GI++TSCQAER+FSAL  ++  L + +
Sbjct:  740 PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSM 777
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155266.3618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE9.670e-655.26Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE9.750e-655.26Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155266contigH-elongata_contig155266:377..544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155266.3618.1mRNA_H-elongata_contig155266.3618.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155266 377..544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155266.3618.1 ID=prot_H-elongata_contig155266.3618.1|Name=mRNA_H-elongata_contig155266.3618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
WPHVGLVARLFTGIDTTSCQAERDFSALKLVVSDLHARLNRHPIPGLGKV
VSELEM
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