prot_H-elongata_contig155115.3611.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155115.3611.1
Unique Nameprot_H-elongata_contig155115.3611.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 3.640e-53
Identity = 105/171 (61.40%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGH--------------------GGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFG 151
             A+SLNNTLIGGRKR+YYHDD+WN+KYL KFKWDHLTEKVAYERRVR QKLRLETMQAKRENARYVELVESGRSFAK+EER                                    GG E   G  A   GV D HRRIRRRFKQS+PV DVGG     +D  VLRS+FG
Sbjct:  173 TAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGGGEGVPGNPA-PAGVGDSHRRIRRRFKQSNPVGDVGGXXXXXMDAKVLRSLFG 342          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: D7FRK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK9_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 2.820e-52
Identity = 104/176 (59.09%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGD-------------------------EAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFG 151
             A+SLNNTLIGGRKR+YYHDD+WN+KYL KFKWDHLTEKVAYERRVR QKLRLETMQAKRENARYVELVESGRSFAK+EER                                            E   G  A   GV D HRRIRRRFKQSSPV DVG      +D  VLRSVFG
Sbjct:   17 TAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVPG-NAAPAGVGDSHRRIRRRFKQSSPVGDVGXXXXXXMDAKVLRSVFG 191          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A7S3US98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US98_HETAK)

HSP 1 Score: 126 bits (316), Expect = 1.200e-33
Identity = 75/155 (48.39%), Postives = 97/155 (62.58%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTD-VLRSVFGASS 154
            VA  LNN  IGG+KR +Y +DIWNIKYL KFKW HLTEK+AYE+RVREQKLRLE MQAK+ENA Y+ELVE G+   K+EE++ K+ + +G   +P     E             +   +IRR FKQ     ++ G        D +LRSVF ++S
Sbjct:   46 VAQHLNNKQIGGKKRHFYREDIWNIKYLKKFKWRHLTEKIAYEKRVREQKLRLEMMQAKKENAEYIELVEKGKKIQKMEEKRAKKNKGSGNEPSPTTAEKE-------------ERPSKIRRTFKQLKGSNELTGDTKNARVGDSLLRSVFSSTS 187          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 125 bits (313), Expect = 2.240e-32
Identity = 73/158 (46.20%), Postives = 92/158 (58.23%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFGASSKKRQ 158
            VA  LN   IGGRKR YYHDDIWN+KYL  FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E VE  + F K+EERK                     SGA  G       +++IRR F+Q +P +          DT +L  VF ++ KKR+
Sbjct:  121 VAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEERK---------------------SGANGGANDRDAQYQQIRRTFQQKAPTSSKQHSSLGSSDT-LLEKVFASAHKKRK 256          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A7S2XZV6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.420e-31
Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFG 151
            VA SLNNT IGG+KR +Y +D+WNIKYL  FKW HLTEK+AYERRV EQ+LR+E MQA++EN  ++ELVE G+    +EERK+    E G    PG      ++      +G     ++I R+F Q++ +      +   +D  VL+SVFG
Sbjct:  122 VAASLNNTQIGGKKRDFYREDMWNIKYLKHFKWRHLTEKIAYERRVAEQRLRMEVMQARKENQAFLELVEQGKQIKGMEERKK----EKGANKDPGRLSKSTSA------SGENRLGKKIHRKFHQTTTITQTSDNI---VDAQVLKSVFG 259          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A8J9SXP0_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SXP0_PHATR)

HSP 1 Score: 119 bits (298), Expect = 2.460e-31
Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKR 85
            VA ++NNT + G+KRS++HDD+WN+KYL KF+W HLTEKVAYERRVREQKLRLETMQA+RE A Y  LVE+G+   +IE RKRKR
Sbjct:   70 VAANMNNTPMSGQKRSHHHDDLWNLKYLSKFQWSHLTEKVAYERRVREQKLRLETMQARRETASYKHLVETGKKVDRIEARKRKR 154          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A3M6VQV5_9STRA (RRM domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQV5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.080e-31
Identity = 70/158 (44.30%), Postives = 90/158 (56.96%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFGASSKKRQ 158
            VA  LN T IGGRKR YYHDDIWN+KYL  FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E V+  + F K+E RK                     +  +  K G  D  +++RR F Q +P +       + L    L  VF ASSK ++
Sbjct:  103 VAKMLNTTQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMEARK---------------------ADKKMDKDGAHDTMQQVRRTFHQKTPTSSK---QNQSLGDRDLEKVFVASSKNKK 236          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A7S2WFD3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 9.560e-31
Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYH--RRIRRRFKQSSPVADVGGGVGKGLDTDVLRSV 149
            VA+SLNNT +GG+KR +Y +DIWN+KYL KF W HLTEK AYERRVRE KLRLE + AK++N  + E+V+  +    IEERK  R     R      G D  A   E+  TG+A      +IRRRF Q  P+ +   G    LD+D+L  +
Sbjct:  123 VAESLNNTKVGGKKRGFYTEDIWNLKYLRKFTWSHLTEKKAYERRVREHKLRLEMVAAKKQNEEFREMVDKNKMIRSIEERKSSRK----RAAENAEGED--AGDLESSTTGMAGLGSMNKIRRRFHQHKPIVEAKRGRAAPLDSDILSKM 267          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 120 bits (301), Expect = 9.690e-31
Identity = 70/161 (43.48%), Postives = 93/161 (57.76%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGG---GVGKGLDTDVLRSVFGASSKKRQ 158
            VA  LN TLIGGRKR YYHDD+WN+KYL  FKWDHLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E V+  + F K++ RK  + + +                     +   D  +++RR F Q +P +       G G GL    L  VF ASSK ++
Sbjct:  106 VAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDARKADKKQHS---------------------SAAQDVMQQVRRTFHQKAPTSSKQNQSLGDGNGL----LEKVFVASSKNKK 241          
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 119 bits (299), Expect = 2.020e-30
Identity = 74/158 (46.84%), Postives = 95/158 (60.13%), Query Frame = 0
Query:    1 VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQKLRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGDEAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVFGASSKKRQ 158
            VA  LN   IGGRKR YYHDDIWN+KYL  FKW+HLTEK+AYE R+R+QKLR+E  QAK+EN  Y+E VE  + F K+EERK               GG +A++ A+           +IRR F Q +P A        G + ++L  VF AS+KKR+
Sbjct:  115 VATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEERK---------------GGKQASADAQ-----------QIRRTFVQKAP-ASAKDEQSLGGNAELLNKVF-ASNKKRK 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155115.3611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDQ8_9PHAE3.640e-5361.40RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRK9_ECTSI2.820e-5259.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3US98_HETAK1.200e-3348.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WDP5_GLOUD2.240e-3246.20RRM domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S2XZV6_9STRA2.420e-3145.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J9SXP0_PHATR2.460e-3169.41Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A3M6VQV5_9STRA6.080e-3144.30RRM domain-containing protein n=1 Tax=Peronospora ... [more]
A0A7S2WFD3_9STRA9.560e-3147.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3HB09_PHYRM9.690e-3143.48RRM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A8K1FEZ1_PYTOL2.020e-3046.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availablePANTHERPTHR12311:SF7ACTIVATOR OF BASAL TRANSCRIPTION 1coord: 1..132
IPR039119ABT1/Esf2PANTHERPTHR12311FAMILY NOT NAMEDcoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155115contigH-elongata_contig155115:407..1088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155115.3611.1mRNA_H-elongata_contig155115.3611.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155115 407..1088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155115.3611.1 ID=prot_H-elongata_contig155115.3611.1|Name=mRNA_H-elongata_contig155115.3611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
VADSLNNTLIGGRKRSYYHDDIWNIKYLCKFKWDHLTEKVAYERRVREQK
LRLETMQAKRENARYVELVESGRSFAKIEERKRKRYEEAGRTVTPGHGGD
EAASGAEAGKTGVADYHRRIRRRFKQSSPVADVGGGVGKGLDTDVLRSVF
GASSKKRQSDDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039119ABT1/Esf2