prot_H-elongata_contig154896.3602.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154896.3602.1
Unique Nameprot_H-elongata_contig154896.3602.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: D7G9D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 4.960e-22
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVRE 49
            DTPFRQQRVTSFLPILQPL+VVGIFLAIGVVFIPLGKWFIEES+ V E
Sbjct:   33 DTPFRQQRVTSFLPILQPLLVVGIFLAIGVVFIPLGKWFIEESEEVVE 80          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 8.400e-19
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVRE 49
            DTPFRQQRVTSFLPILQPL+VVGIF AIGV FIPLGKWFIEES+ V E
Sbjct:   33 DTPFRQQRVTSFLPILQPLLVVGIFFAIGVAFIPLGKWFIEESEEVVE 80          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A8H3WL82_9PEZI (Lem3 cdc50 family protein n=1 Tax=Colletotrichum asianum TaxID=702518 RepID=A0A8H3WL82_9PEZI)

HSP 1 Score: 53.1 bits (126), Expect = 8.190e-7
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPF+QQR+ ++ PIL P I + IFL+IG++F+ +G +++  +D VRE+
Sbjct:   33 DTPFKQQRMKAWEPILTPKISIRIFLSIGIIFLAIGVFWLVVNDQVREI 81          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A1V9YZG8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZG8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.350e-7
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPF+QQR+ ++ PIL P  V+G F  +G++FIP+G +  EE+  + E+
Sbjct:  420 DTPFKQQRLKAWQPILTPNWVIGTFFLVGLIFIPIGVFLFEENQNITEM 468          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A067C6T3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6T3_SAPPC)

HSP 1 Score: 52.4 bits (124), Expect = 1.550e-6
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPF+QQR+ ++ PIL P  V+G F  +G++FIP+G +  EE+  + E+
Sbjct:   14 DTPFKQQRLKAWQPILTPNWVIGTFFVVGLIFIPIGVFLFEENKNIVEM 62          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A7S0DYV8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYV8_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 1.550e-6
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPFRQQ + ++ PIL P +VV  F  +G VFIP+G   I ESD V EV
Sbjct:   33 DTPFRQQTLKAWRPILTPKVVVLTFFLVGCVFIPIGCVIISESDKVVEV 81          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A1V9Z551_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z551_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.120e-6
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPF+QQR+ ++ PIL P  V+G F  +G++FIP+G +  EE  ++ E+
Sbjct:   14 DTPFKQQRLKAWQPILTPNWVIGTFFLVGLIFIPIGVFLFEEDKSIVEM 62          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A1Y2ESB6_9FUNG (Lem3/Cdc50 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ESB6_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 2.870e-6
Identity = 21/49 (42.86%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPF+QQR+ ++ P+L P+ V+ +FL IG++FIP+G      S+++ E+
Sbjct:   12 DTPFKQQRLKAWQPLLTPINVIPLFLIIGIIFIPIGIGLYLSSESINEI 60          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A7S3AL04_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AL04_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 5.430e-6
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 DTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            DTPFRQQ + ++ PIL P +V+ +FL +GVVFIP+G   +  S+ V E+
Sbjct:   11 DTPFRQQNLKAWRPILTPNLVILLFLIVGVVFIPIGVAVLSASNDVIEI 59          
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Match: A0A317T1F8_9PEZI (Lem3/Cdc50 n=2 Tax=Tuber TaxID=36048 RepID=A0A317T1F8_9PEZI)

HSP 1 Score: 50.8 bits (120), Expect = 5.440e-6
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 ADTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV 50
            ADTPFRQQRV ++ PIL P  V+ +F A+G+VF P+G   +  S  V+E+
Sbjct:   24 ADTPFRQQRVKAWHPILTPRTVLPLFFAVGIVFGPIGGLLLWASTQVQEL 73          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154896.3602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D0_ECTSI4.960e-2291.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE3_9PHAE8.400e-1987.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8H3WL82_9PEZI8.190e-746.94Lem3 cdc50 family protein n=1 Tax=Colletotrichum a... [more]
A0A1V9YZG8_9STRA8.350e-744.90Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067C6T3_SAPPC1.550e-644.90Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A7S0DYV8_9EUKA1.550e-655.10Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A1V9Z551_9STRA2.120e-644.90Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1Y2ESB6_9FUNG2.870e-642.86Lem3/Cdc50 n=1 Tax=Neocallimastix californiae TaxI... [more]
A0A7S3AL04_9EUKA5.430e-648.98Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A317T1F8_9PEZI5.440e-650.00Lem3/Cdc50 n=2 Tax=Tuber TaxID=36048 RepID=A0A317T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154896contigH-elongata_contig154896:1165..1314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154896.3602.1mRNA_H-elongata_contig154896.3602.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154896 1165..1314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154896.3602.1 ID=prot_H-elongata_contig154896.3602.1|Name=mRNA_H-elongata_contig154896.3602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
ADTPFRQQRVTSFLPILQPLIVVGIFLAIGVVFIPLGKWFIEESDTVREV
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