prot_H-elongata_contig15462.3589.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15462.3589.1
Unique Nameprot_H-elongata_contig15462.3589.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length323
Homology
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BLAST of mRNA_H-elongata_contig15462.3589.1 vs. uniprot
Match: D7FUV4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV4_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 9.500e-84
Identity = 179/313 (57.19%), Postives = 204/313 (65.18%), Query Frame = 0 
Query:   11 LQHKLSQPIAVSGRMTRTATKVTPRLEFSTKGGGAGGKTPGSGXXXXXXXXXXXTGSLMSPSESRAKRGPTTAREGFGMPNRRVFKSPRTSLDRDATPSRMRTPILDSRRDRXXXXXXXXXXXXRVHAQRIFTVSDEEIEQLVKTRPKKGTSKWDYKARLQSQNELLTKLRATLETMHQQKRLFRDACIDTEAALKAEMRKVNLRCEDVERDHVELLDENARFQSMEAGLKADLKLAAEERTVLRAENEKLHTKLEAMVADGQSRTNEAETLLSMAREKLSLAESRASETLTLQEKEWEYRMNSATSDALKQV 323
            L HKLSQPIAVSGRMTRTATKV PRLEFS++   A   T G G             S+ SPS  R KR         G   RRV KSPRTS+DRD TP R RTP  + R               RVHAQRIFTVSD+++E ++KT+ K G SKWDYK R+Q+QNELL +LRA L TM QQK+ F+DACIDTEAALKAEMRKVN RCEDVERDHVELLDENAR+QS+EAGLKADLKLA EER +LRAENEKL TKLEA VADG                            L  +E+EWE R++SATS A ++V
Sbjct:  292 LSHKLSQPIAVSGRMTRTATKVKPRLEFSSRAAAA---TGGGGSAL----------SMTSPSSGRTKRNAGAP----GSATRRVHKSPRTSIDRDYTPLRSRTPGSEGR------------GGIRVHAQRIFTVSDDDVEDMLKTKVK-GASKWDYKTRIQNQNELLAQLRAMLNTMLQQKQRFKDACIDTEAALKAEMRKVNSRCEDVERDHVELLDENARYQSVEAGLKADLKLAKEERALLRAENEKLATKLEAKVADGXXXXXXXXXXXXXXXXXXXXXXXXXXMALAQKEQEWETRIDSATSGAHQEV 574
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BLAST of mRNA_H-elongata_contig15462.3589.1 vs. uniprot
Match: A0A6H5JJH6_9PHAE (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH6_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 5.920e-78
Identity = 179/330 (54.24%), Postives = 205/330 (62.12%), Query Frame = 0 
Query:   11 LQHKLSQPIAVSGRMTRTATKVTPRLEFSTKGGGAGGKTPGSGXXXXXXXXXXXTGSLMSPSESRAKRGPTTAREGFGMPNRRVFKSPRTSLDRDATPSRMRTPILDSRRDRXXXXXXXXXXXXRVHAQRIFTVSDEEIEQLVKTRPKKGTSKWDYKARLQSQNELLTKLRATLETMHQQKRLFRDACIDTEAALKAEMRKVNLRCEDVERDHVELLDENARFQSMEAGLKADLKLAAEERTVLRAENEKLHTK-----------------LEAMVADGQSRTNEAETLLSMAREKLSLAESRASETLTLQEKEWEYRMNSATSDALKQV 323
            L HKLSQPIAVSGRMTRTATKV PRLEFS++   A G + GS              S+ SPS  R KR         G   RRV KSPRTS+DRD TP R RTP  + R               RVHAQRIFTVSD+++E ++KT+ K G SKWDYK R+Q+QNELL +LRA L TM QQK+ F+DACIDTEAALKAEMRKVN RCEDVERDHVELLDENAR+QS+EAGLKADLKLA EER +LRAENEKL TK                 LEA VADG                            L  +E+EWE R++SATS A ++V
Sbjct:  295 LSHKLSQPIAVSGRMTRTATKVKPRLEFSSRAVAAAG-SGGSAL------------SMTSPSSGRTKRNAGAP----GSATRRVHKSPRTSIDRDYTPLRSRTPGSEGR------------GGIRVHAQRIFTVSDDDVEDMLKTKVK-GASKWDYKTRIQNQNELLAQLRAMLNTMLQQKQRFKDACIDTEAALKAEMRKVNSRCEDVERDHVELLDENARYQSVEAGLKADLKLAKEERALLRAENEKLATKADALRDGLSRAEGDLLKLEAKVADGXXXXXXXXXXXXXXXXXXXXXXXXXXMALAQKEQEWETRIDSATSGAHQEV 594
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15462.3589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUV4_ECTSI9.500e-8457.19Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJH6_9PHAE5.920e-7854.24Kinesin motor domain-containing protein (Fragment)... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..229
NoneNo IPR availableCOILSCoilCoilcoord: 170..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15462contigH-elongata_contig15462:3628..7275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15462.3589.1mRNA_H-elongata_contig15462.3589.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15462 3628..7275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15462.3589.1 ID=prot_H-elongata_contig15462.3589.1|Name=mRNA_H-elongata_contig15462.3589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=323bp
MQSVWCASCVLQHKLSQPIAVSGRMTRTATKVTPRLEFSTKGGGAGGKTP
GSGGVAGGKGGGAGTGSLMSPSESRAKRGPTTAREGFGMPNRRVFKSPRT
SLDRDATPSRMRTPILDSRRDRDRDRGGGGGVGVRVHAQRIFTVSDEEIE
QLVKTRPKKGTSKWDYKARLQSQNELLTKLRATLETMHQQKRLFRDACID
TEAALKAEMRKVNLRCEDVERDHVELLDENARFQSMEAGLKADLKLAAEE
RTVLRAENEKLHTKLEAMVADGQSRTNEAETLLSMAREKLSLAESRASET
LTLQEKEWEYRMNSATSDALKQV
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