prot_H-elongata_contig152882.3495.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152882.3495.1
Unique Nameprot_H-elongata_contig152882.3495.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig152882.3495.1 vs. uniprot
Match: D7G4L3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L3_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.080e-19
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 VEEAKQEFDTGARRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK 46
            VEEAK EFDTGA RGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK
Sbjct:  268 VEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK 313          
BLAST of mRNA_H-elongata_contig152882.3495.1 vs. uniprot
Match: A0A6H5KKI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 5.920e-19
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 VEEAKQEFDTGARRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK 46
            VEEAK EFDTGA RG+EMDGEVGSGAQIAWNTGLAEIALPIEFKLK
Sbjct:  189 VEEAKVEFDTGANRGNEMDGEVGSGAQIAWNTGLAEIALPIEFKLK 234          
BLAST of mRNA_H-elongata_contig152882.3495.1 vs. uniprot
Match: A0A836CP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP27_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.040e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 VEEAKQEFDTGARRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK 46
            V EAK  F  G  + D++DGE+G GAQIAWNTG+AE+ LPI+ K++
Sbjct:    5 VHEAKAMF--GTFKADDLDGEIGQGAQIAWNTGIAEVDLPIDVKMR 48          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152882.3495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4L3_ECTSI2.080e-1995.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KKI7_9PHAE5.920e-1993.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CP27_9STRA3.040e-856.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152882contigH-elongata_contig152882:1081..1221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152882.3495.1mRNA_H-elongata_contig152882.3495.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152882 1081..1221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152882.3495.1 ID=prot_H-elongata_contig152882.3495.1|Name=mRNA_H-elongata_contig152882.3495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
VEEAKQEFDTGARRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLK*
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