prot_H-elongata_contig15176.3425.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15176.3425.1
Unique Nameprot_H-elongata_contig15176.3425.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
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BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A2W1G367_9PLEO (Uncharacterized protein (Fragment) n=1 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A2W1G367_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 3.690e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:   58 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 144
[Close]
BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A834RH90_9PLEO (Integrase catalytic domain-containing protein n=1 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A834RH90_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 5.580e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:   16 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 102
[Close]
BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A2W1FNW1_9PLEO (Uncharacterized protein (Fragment) n=1 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A2W1FNW1_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 5.990e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:  217 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 303
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BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A316ZVW4_9PLEO (Uncharacterized protein n=2 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A316ZVW4_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 6.640e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:  430 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 516
[Close]
BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A834RNU4_9PLEO (Integrase catalytic domain-containing protein n=1 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A834RNU4_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 6.800e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:   16 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 102
[Close]
BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Match: A0A834VT98_9PLEO (Integrase catalytic domain-containing protein n=8 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A834VT98_9PLEO)

HSP 1 Score: 52.8 bits (125), Expect = 7.410e-5
Identity = 30/88 (34.09%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   86 VSESWIFDSGSSGHVTPNADQLRSFRTC--NRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELINVAYVPRLSYHLLSLPTFAKQG 171
            +S S+IFDSGS+ H+T N D++ ++R      F+   N +Q+ I+GYG + +     Q V ++ L +VA  P +  +++S     KQG
Sbjct:   16 LSNSFIFDSGSTCHITNNPDRIHNYRPPIHGDFIWAGN-SQIWIKGYGSIVIQLEHKQRVEKLVLHDVAICPDILCNIVSFRVLRKQG 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15176.3425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2W1G367_9PLEO3.690e-534.09Uncharacterized protein (Fragment) n=1 Tax=Pyrenop... [more]
A0A834RH90_9PLEO5.580e-534.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A2W1FNW1_9PLEO5.990e-534.09Uncharacterized protein (Fragment) n=1 Tax=Pyrenop... [more]
A0A316ZVW4_9PLEO6.640e-534.09Uncharacterized protein n=2 Tax=Pyrenophora tritic... [more]
A0A834RNU4_9PLEO6.800e-534.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A834VT98_9PLEO7.410e-534.09Integrase catalytic domain-containing protein n=8 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 42..58
e-value: 0.24
score: 15.1
coord: 60..76
e-value: 0.29
score: 14.5
NoneNo IPR availableGENE3D4.10.60.10coord: 33..78
e-value: 1.0E-6
score: 30.4
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 4..172
NoneNo IPR availablePANTHERPTHR34676:SF1coord: 4..172
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 38..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15176contigH-elongata_contig15176:368..1129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15176.3425.1mRNA_H-elongata_contig15176.3425.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15176 368..1129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15176.3425.1 ID=prot_H-elongata_contig15176.3425.1|Name=mRNA_H-elongata_contig15176.3425.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
ASRGERSNASDKGSNKKSSGGGENSSGDSVGSEKPAAVKGPLCSACRHRG
HISSECTAEICKRCGGVGHSESSCSSSPDVKEAGGVSESWIFDSGSSGHV
TPNADQLRSFRTCNRFLRVANGTQLPIEGYGDLTVDFRSGQGVVRVELIN
VAYVPRLSYHLLSLPTFAKQGHFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf